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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 6
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:peroxisome, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:peroxisome
Plant-mPloc:golgi, plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER90450 Sorghum plasma membrane 85.61 86.57
Zm00001d014901_P001 Maize plasma membrane 84.69 85.63
Os02t0823000-01 Rice plasma membrane 81.18 80.73
TraesCS7D01G543700.1 Wheat plasma membrane 80.26 79.23
TraesCS7A01G568900.1 Wheat plasma membrane 81.0 77.7
GSMUA_Achr4P12000_001 Banana plasma membrane 75.46 77.02
GSMUA_Achr10P... Banana plasma membrane 74.91 76.32
TraesCS7B01G489700.3 Wheat plasma membrane, vacuole 79.89 75.7
KRH77554 Soybean extracellular, golgi 23.25 74.12
Bra033245.1-P Field mustard plasma membrane 65.68 72.06
HORVU7Hr1G122650.3 Barley nucleus, plasma membrane 80.44 71.36
VIT_15s0046g02460.t01 Wine grape plasma membrane 70.11 71.16
VIT_02s0012g02640.t01 Wine grape golgi, plasma membrane, plastid 19.19 69.33
CDX90049 Canola plasma membrane 69.0 69.26
CDY45351 Canola plasma membrane 68.82 69.2
VIT_02s0025g03400.t01 Wine grape plasma membrane 69.93 69.16
CDY15163 Canola plasma membrane 68.82 69.07
Bra027793.1-P Field mustard plasma membrane 68.63 69.02
KRH48125 Soybean plasma membrane 68.82 68.95
PGSC0003DMT400032136 Potato plasma membrane 69.19 68.93
Solyc08g081180.2.1 Tomato plasma membrane 69.19 68.93
KRH00766 Soybean plasma membrane 68.45 68.83
CDY08318 Canola plasma membrane 68.45 68.83
KRH65010 Soybean plasma membrane 68.82 68.82
KRH40447 Soybean plasma membrane 68.27 68.65
AT1G63690.1 Thale cress plasma membrane 68.27 68.52
CDY38021 Canola plasma membrane 68.27 68.52
AT1G01650.1 Thale cress plasma membrane 67.9 68.15
KRH27921 Soybean plasma membrane 68.27 68.14
Bra032646.1-P Field mustard plasma membrane 67.53 67.9
Solyc10g012430.2.1 Tomato plasma membrane 65.31 65.31
Solyc01g094680.2.1 Tomato plasma membrane 64.94 65.31
KRH77552 Soybean plasma membrane 44.28 64.34
KRH54524 Soybean plasma membrane 27.12 58.1
Os11t0433200-02 Rice cytosol, plasma membrane 43.54 51.87
KRH66530 Soybean golgi, plasma membrane, plastid 18.45 51.02
Os01t0914700-01 Rice plasma membrane 39.85 41.3
Os05t0436400-03 Rice plasma membrane 14.76 27.97
Os10t0393100-01 Rice plasma membrane 18.27 26.68
Os02t0117400-01 Rice plasma membrane 16.61 26.24
KRH61017 Soybean cytosol 31.18 21.69
Os02t0823100-01 Rice plasma membrane 3.87 7.29
Protein Annotations
MapMan:18.10.1.4Gene3D:3.50.30.30EntrezGene:4342150EMBL:AK062118EMBL:AK065172ProteinID:BAD62128.1
ProteinID:BAD62487.1ProteinID:BAF20573.1ProteinID:BAS99650.1ProteinID:EEE66404.1GO:GO:0003674GO:GO:0003824
GO:GO:0004190GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005764
GO:GO:0005765GO:GO:0005768GO:GO:0005773GO:GO:0005783GO:GO:0005794GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0010008GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0019538GO:GO:0030660GO:GO:0071458GO:GO:0071556EnsemblPlantsGene:Os06g0730900EnsemblPlants:Os06t0730900-01
InterPro:PA_domainPFAM:PF02225PFAM:PF04258PANTHER:PTHR12174PANTHER:PTHR12174:SF61InterPro:Peptidase_A22B_SPP
InterPro:Preselin/SPPUniProt:Q5Z413SMART:SM00730SUPFAM:SSF52025SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0000450769RefSeq:XP_015642991.1SEG:seg:::
Description
SPPL5Peptidase A22B, signal peptide peptidase domain containing protein. (Os06t0730900-01);Peptidase A22B, signal peptide peptidase domain containing protein. (Os06t0730900-02);Peptidase A22B, signal peptide peptidase domain containing protein. (Os06t0730900-03)
Coordinates
chr6:+:31151348..31156611
Molecular Weight (calculated)
59699.3 Da
IEP (calculated)
6.960
GRAVY (calculated)
0.430
Length
542 amino acids
Sequence
(BLAST)
001: MAAATAAVFA LLMASALAGA AAGGDIVHHD DEAPKIPGCS NDFILVKVQS WVNGKEDDEY VGVGARFGPQ IVSKEKHANR TRLMLADPID CCTSPKEKVS
101: GDILLVQRGK CKFTKKAKFA EAAGASGIII INHVHELYKM VCEKNETDLD INIPAVLLPR DAGFALHTVL TSGNSVSVQQ YSPDRPVVDT AEVFLWLMAV
201: GTVLCASYWS AWSAREALCE QEKLLKDGRE VLLNVENGSS SGMIDINVAS AIMFVVVASC FLIMLYKMMS SWFVELLVVI FCVGGVEGLQ TCLVALLSRW
301: FRAASESFFK VPFFGAVSYL TLAVSPFCIV FAVLWAVHRH FTYAWIGQDI LGIALIITVI QIVRVPNLKV GSVLLSCAFF YDIFWVFVSK RWFHESVMIV
401: VARGDKTDED GVPMLLKIPR MFDPWGGYSI IGFGDILLPG LLVAFALRYD WAAKKSLQTG YFLWSMVAYG SGLLITYVAL NLMDGHGQPA LLYIVPFTLG
501: ALISLGWKRG ELWNLWSKGE PERVCPHHMH MQPQPKTPPL VQ
Best Arabidopsis Sequence Match ( AT1G63690.1 )
(BLAST)
001: MDSLRFLRIL LLSSSILLLS LRSTVTAGDI VHQDNLAPKK PGCENDFVLV KVQTWIDGVE NEEFVGVGAR FGKRIVSKEK NANQTHLVFA NPRDSCTPLK
101: NKLSGDVVIV ERGNCRFTAK ANNAEAAGAS ALLIINNQKE LYKMVCEPDE TDLDIQIPAV MLPQDAGASL QKMLANSSKV SAQLYSPRRP AVDVAEVFLW
201: LMAIGTILCA SYWSAWSARE AAIEHDKLLK DAIDEIPNTN DGGSGVVEIN SISAIFFVVL ASGFLVILYK LMSYWFVELL VVVFCIGGVE GLQTCLVALL
301: SRWFQRAADT YVKVPFLGPI SYLTLAVSPF CIVFAVLWAV YRVHSFAWIG QDVLGIALII TVLQIVHVPN LKVGTVLLSC AFLYDIFWVF VSKKLFHESV
401: MIVVARGDKS GEDGIPMLLK IPRMFDPWGG YSIIGFGDIL LPGLLIAFAL RYDWLANKTL RTGYFIWAMV AYGLGLLITY VALNLMDGHG QPALLYIVPF
501: TLGTMLTLAR KRDDLWILWT KGEPERACPH HVRLEQCSEK
Arabidopsis Description
SPPL2Signal peptide peptidase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W469]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.