Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- golgi 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_15s0046g02460.t01 | Wine grape | plasma membrane | 94.0 | 26.4 |
| GSMUA_Achr4P12000_001 | Banana | plasma membrane | 76.67 | 21.66 |
| GSMUA_Achr10P... | Banana | plasma membrane | 76.67 | 21.62 |
| Bra033245.1-P | Field mustard | plasma membrane | 70.0 | 21.26 |
| VIT_02s0025g03400.t01 | Wine grape | plasma membrane | 77.33 | 21.17 |
| KRH48125 | Soybean | plasma membrane | 76.0 | 21.07 |
| KRH65010 | Soybean | plasma membrane | 74.67 | 20.66 |
| Os02t0823000-01 | Rice | plasma membrane | 74.0 | 20.37 |
| Solyc10g012430.2.1 | Tomato | plasma membrane | 73.33 | 20.3 |
| Zm00001d014901_P001 | Maize | plasma membrane | 71.33 | 19.96 |
| KRH00766 | Soybean | plasma membrane | 71.33 | 19.85 |
| KRH40447 | Soybean | plasma membrane | 71.33 | 19.85 |
| EER90450 | Sorghum | plasma membrane | 70.67 | 19.78 |
| Solyc01g094680.2.1 | Tomato | plasma membrane | 70.67 | 19.67 |
| AT1G01650.1 | Thale cress | plasma membrane | 70.0 | 19.44 |
| CDY15163 | Canola | plasma membrane | 70.0 | 19.44 |
| CDX90049 | Canola | plasma membrane | 70.0 | 19.44 |
| TraesCS6B01G451100.1 | Wheat | plasma membrane | 70.67 | 19.41 |
| TraesCS6A01G406000.1 | Wheat | plasma membrane | 70.67 | 19.41 |
| Zm00001d051873_P002 | Maize | plasma membrane | 70.67 | 19.34 |
| TraesCS6D01G389600.1 | Wheat | plasma membrane | 70.0 | 19.23 |
| EES06047 | Sorghum | plasma membrane | 70.0 | 19.2 |
| Os06t0730900-01 | Rice | plasma membrane | 69.33 | 19.19 |
| CDY38021 | Canola | plasma membrane | 68.67 | 19.07 |
| Bra032646.1-P | Field mustard | plasma membrane | 67.33 | 18.74 |
| TraesCS7D01G543700.1 | Wheat | plasma membrane | 66.67 | 18.21 |
| TraesCS7A01G568900.1 | Wheat | plasma membrane | 66.67 | 17.7 |
| TraesCS7B01G489700.3 | Wheat | plasma membrane, vacuole | 66.0 | 17.31 |
| TraesCS4D01G010500.1 | Wheat | plasma membrane | 51.33 | 16.45 |
| HORVU7Hr1G122650.3 | Barley | nucleus, plasma membrane | 66.67 | 16.37 |
| VIT_05s0062g01250.t01 | Wine grape | plasma membrane | 42.0 | 11.82 |
| VIT_06s0009g03520.t01 | Wine grape | plasma membrane | 13.33 | 5.87 |
| VIT_16s0050g00580.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 12.0 | 4.85 |
| VIT_03s0097g00390.t01 | Wine grape | mitochondrion | 6.67 | 4.55 |
Protein Annotations
| MapMan:18.10.1.4 | ProteinID:CCB57828 | ProteinID:CCB57828.1 | UniProt:F6HT18 | EMBL:FN596247 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004190 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005764 | GO:GO:0005765 | GO:GO:0005773 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0030660 | GO:GO:0071458 | GO:GO:0071556 | PFAM:PF04258 | PANTHER:PTHR12174 | PANTHER:PTHR12174:SF58 |
| InterPro:Peptidase_A22B_SPP | TMHMM:TMhelix | UniParc:UPI00021096C2 | ArrayExpress:VIT_02s0012g02640 | EnsemblPlantsGene:VIT_02s0012g02640 | EnsemblPlants:VIT_02s0012g02640.t01 |
Description
No Description!
Coordinates
chr2:+:10259560..10260238
Molecular Weight (calculated)
16550.1 Da
IEP (calculated)
4.536
GRAVY (calculated)
0.819
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGTILSAS YWSAWSAREA ANEQDKLLKD ASDEFLSTEG TGSSGMADIN TTSAVLFVVI ASCFLVMLYK FISFWFVEVL VVLFRIGGVE GLQTCLVALL
101: SCFRWFEQAA ESFVKVPFFG AVSYLTLAMS PFCIAFAIVW AVFFRRINLA
101: SCFRWFEQAA ESFVKVPFFG AVSYLTLAMS PFCIAFAIVW AVFFRRINLA
001: MILWKSLSCF SFVFGLLLYS ASFVCAGDIV HHDDSLPQRP GCNNNFVLVK VPTRVNGSEY TEYVGVGARF GPTLESKEKH ATLIKLAIAD PPDCCSTPKN
101: KLTGEVILVH RGKCSFTTKT KVAEAAGASA ILIINNSTDL FKMVCEKGEN VLDITIPVVM LPVDAGRSLE NIVKSNAIVT LQLYSPKRPA VDVAEVFLWL
201: MAVGTILCAS YWSAWTVREE AIEQDKLLKD GSDELLQLST TSSRGVVEVT VISAILFVVV ASCFLIMLYK LMSFWFIEVL VVLFCIGGVE GLQTCLVSLL
301: SCFRWFRRFG ESYVKVPFLG AVSYLTLAIC PFCIAFAVFW AVKRQYSYAW IGQDILGISL IITVLQIVRV PNLKVGFVLL SCAFMYDIFW VFVSKWWFRE
401: SVMIVVARGD RSGEDGIPML LKIPRMFDPW GGYSIIGFGD IILPGLLVTF ALRYDWLANK RLKSGYFLGT MSAYGLGLLI TYIALNLMDG HGQPALLYIV
501: PFILGTLFVL GHKRGDLKTL WTTGEPDRPC PHVRLQPQSS
101: KLTGEVILVH RGKCSFTTKT KVAEAAGASA ILIINNSTDL FKMVCEKGEN VLDITIPVVM LPVDAGRSLE NIVKSNAIVT LQLYSPKRPA VDVAEVFLWL
201: MAVGTILCAS YWSAWTVREE AIEQDKLLKD GSDELLQLST TSSRGVVEVT VISAILFVVV ASCFLIMLYK LMSFWFIEVL VVLFCIGGVE GLQTCLVSLL
301: SCFRWFRRFG ESYVKVPFLG AVSYLTLAIC PFCIAFAVFW AVKRQYSYAW IGQDILGISL IITVLQIVRV PNLKVGFVLL SCAFMYDIFW VFVSKWWFRE
401: SVMIVVARGD RSGEDGIPML LKIPRMFDPW GGYSIIGFGD IILPGLLVTF ALRYDWLANK RLKSGYFLGT MSAYGLGLLI TYIALNLMDG HGQPALLYIV
501: PFILGTLFVL GHKRGDLKTL WTTGEPDRPC PHVRLQPQSS
Arabidopsis Description
SPPL4Signal peptide peptidase-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q0WMJ8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.