Factsheet for TraesCS7B01G489700.3

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	peroxisome, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G543700.1	Wheat	plasma membrane	93.53	97.45
TraesCS7A01G568900.1	Wheat	plasma membrane	94.41	95.58
HORVU7Hr1G122650.3	Barley	nucleus, plasma membrane	92.48	86.58
EER90450	Sorghum	plasma membrane	76.22	81.34
Zm00001d014901_P001	Maize	plasma membrane	75.7	80.78
Os06t0730900-01	Rice	plasma membrane	75.7	79.89
TraesCS6B01G451100.1	Wheat	plasma membrane	71.68	75.09
KRH77554	Soybean	extracellular, golgi	22.03	74.12
GSMUA_Achr4P12000_001	Banana	plasma membrane	67.31	72.5
GSMUA_Achr10P...	Banana	plasma membrane	66.96	71.99
VIT_15s0046g02460.t01	Wine grape	plasma membrane	66.08	70.79
Bra033245.1-P	Field mustard	plasma membrane	59.44	68.83
Solyc08g081180.2.1	Tomato	plasma membrane	64.34	67.65
AT1G63690.1	Thale cress	plasma membrane	63.81	67.59
PGSC0003DMT400032136	Potato	plasma membrane	64.16	67.46
CDY45351	Canola	plasma membrane	63.29	67.16
Bra027793.1-P	Field mustard	plasma membrane	63.11	66.98
VIT_02s0025g03400.t01	Wine grape	plasma membrane	64.16	66.97
CDY08318	Canola	plasma membrane	62.94	66.79
KRH27921	Soybean	plasma membrane	63.11	66.48
CDY38021	Canola	plasma membrane	62.76	66.48
CDX90049	Canola	plasma membrane	62.59	66.3
Bra032646.1-P	Field mustard	plasma membrane	62.41	66.23
CDY15163	Canola	plasma membrane	62.41	66.11
KRH40447	Soybean	plasma membrane	62.24	66.05
VIT_02s0012g02640.t01	Wine grape	golgi, plasma membrane, plastid	17.31	66.0
KRH48125	Soybean	plasma membrane	62.41	65.99
AT1G01650.1	Thale cress	plasma membrane	62.24	65.93
KRH65010	Soybean	plasma membrane	62.41	65.87
KRH00766	Soybean	plasma membrane	61.71	65.49
Solyc01g094680.2.1	Tomato	plasma membrane	60.14	63.82
Solyc10g012430.2.1	Tomato	plasma membrane	59.62	62.92
KRH77552	Soybean	plasma membrane	40.56	62.2
KRH54524	Soybean	plasma membrane	25.17	56.92
KRH66530	Soybean	golgi, plasma membrane, plastid	17.48	51.02
TraesCS3B01G455800.1	Wheat	plasma membrane, plastid	34.97	35.46
TraesCS6B01G064600.2	Wheat	plasma membrane	15.56	26.1
TraesCS3B01G545500.1	Wheat	plasma membrane	15.56	25.87
TraesCS6B01G064500.2	Wheat	plasma membrane	15.38	25.81
TraesCS7B01G181000.2	Wheat	plasma membrane	16.61	25.54
KRH61017	Soybean	cytosol	30.07	22.08

Protein Annotations

EnsemblPlants:TraesCS7B01G489700.3	EnsemblPlantsGene:TraesCS7B01G489700	Gene3D:3.50.30.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	InterPro:PA_domain	InterPro:Peptidase_A22B_SPP
InterPro:Preselin/SPP	PANTHER:PTHR12174	PANTHER:PTHR12174:SF61	PFAM:PF02225	PFAM:PF04258	SEG:seg
SignalP:SignalP-noTM	SMART:SM00730	SUPFAM:SSF52025	TMHMM:TMhelix	MapMan:18.10.1.4	:

Description

No Description!

Coordinates

chr7B:+:743616728..743620219

Molecular Weight (calculated)

61605.0 Da

IEP (calculated)

5.004

GRAVY (calculated)

0.398

Length

572 amino acids

Sequence
(BLAST)

001: MAASAVLAVL LASALAGAAA GGDIVHQDDQ APKIPGCNND FVLVKVQSWV GSNEGDEFVG VGARFGPKIV SKEKQATREP LTLADPIHAC APPKNNKVSG
101: GVLLVERGKC KFTKKAKLAE AAGASGILII NSGTELYKMV CEKNETELDI HIPAVLLPKD AGQALRSLLA ANTSSVGVQL YSPDRPVVDT AEVFLWLMAV
201: GTVLCASYWS AWSAREAVTE QEKLLKDGHE VSLTVEGGGS SGIVDINVIS AMMFVVVASC FLIMLYKLMS AWFIDLLVVI FCIGGVEGLQ TCLVAILSRW
301: FTSAAGSFVK VPFFGAISYL TMVVSPFCVV FAVLWAIYRQ FPYAWIAQDI LVSAAAVCSV QGIALIVTVI QIVRVPNLKV GSVLLSCAFL YDIFWVFVSK
401: SLFHESVMIA VARGDNTDED GVPMLLKIPR MFDPWGGYSI IGFGDILLPG LVVAFALRYD WAAKKKSLRS GYFLWSASAY GTGLLITYVA LNLMDGHGQP
501: ALLYIVPFTL GTLMSLGWKR GELRNLWFKG EPERVCTHQG QGYVQMAKPP AAGDDEDDDE DEDDEEGKPS SS

Best Arabidopsis Sequence Match ( AT1G01650.1 )
(BLAST)

001: MILWKSLSCF SFVFGLLLYS ASFVCAGDIV HHDDSLPQRP GCNNNFVLVK VPTRVNGSEY TEYVGVGARF GPTLESKEKH ATLIKLAIAD PPDCCSTPKN
101: KLTGEVILVH RGKCSFTTKT KVAEAAGASA ILIINNSTDL FKMVCEKGEN VLDITIPVVM LPVDAGRSLE NIVKSNAIVT LQLYSPKRPA VDVAEVFLWL
201: MAVGTILCAS YWSAWTVREE AIEQDKLLKD GSDELLQLST TSSRGVVEVT VISAILFVVV ASCFLIMLYK LMSFWFIEVL VVLFCIGGVE GLQTCLVSLL
301: SCFRWFRRFG ESYVKVPFLG AVSYLTLAIC PFCIAFAVFW AVKRQYSYAW IGQDILGISL IITVLQIVRV PNLKVGFVLL SCAFMYDIFW VFVSKWWFRE
401: SVMIVVARGD RSGEDGIPML LKIPRMFDPW GGYSIIGFGD IILPGLLVTF ALRYDWLANK RLKSGYFLGT MSAYGLGLLI TYIALNLMDG HGQPALLYIV
501: PFILGTLFVL GHKRGDLKTL WTTGEPDRPC PHVRLQPQSS

Arabidopsis Description

SPPL4Signal peptide peptidase-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q0WMJ8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.