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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY15163 Canola plasma membrane 99.44 99.44
Bra033245.1-P Field mustard plasma membrane 90.56 98.99
CDY38021 Canola plasma membrane 92.04 92.04
AT1G01650.1 Thale cress plasma membrane 89.63 89.63
VIT_15s0046g02460.t01 Wine grape plasma membrane 75.0 75.84
Solyc01g094680.2.1 Tomato plasma membrane 74.07 74.21
KRH48125 Soybean plasma membrane 73.15 73.01
KRH00766 Soybean plasma membrane 72.59 72.73
KRH40447 Soybean plasma membrane 72.22 72.36
Solyc10g012430.2.1 Tomato plasma membrane 72.59 72.32
KRH65010 Soybean plasma membrane 72.22 71.96
GSMUA_Achr4P12000_001 Banana plasma membrane 70.56 71.75
EER90450 Sorghum plasma membrane 69.81 70.34
VIT_02s0012g02640.t01 Wine grape golgi, plasma membrane, plastid 19.44 70.0
Zm00001d014901_P001 Maize plasma membrane 69.44 69.96
CDY45351 Canola plasma membrane 69.26 69.39
GSMUA_Achr10P... Banana plasma membrane 68.33 69.36
Os06t0730900-01 Rice plasma membrane 69.26 69.0
CDY08318 Canola plasma membrane 68.52 68.65
Os02t0823000-01 Rice plasma membrane 68.33 67.71
TraesCS6D01G389600.1 Wheat plasma membrane 66.67 65.93
TraesCS6A01G406000.1 Wheat plasma membrane 66.48 65.75
EES06047 Sorghum plasma membrane 66.48 65.63
TraesCS6B01G451100.1 Wheat plasma membrane 66.11 65.38
TraesCS7D01G543700.1 Wheat plasma membrane 66.11 65.03
TraesCS7A01G568900.1 Wheat plasma membrane 67.04 64.07
Zm00001d051873_P002 Maize plasma membrane 64.26 63.32
TraesCS7B01G489700.3 Wheat plasma membrane, vacuole 66.3 62.59
HORVU7Hr1G122650.3 Barley nucleus, plasma membrane 66.85 59.08
TraesCS4D01G010500.1 Wheat plasma membrane 46.67 53.85
CDY53660 Canola plasma membrane 25.19 49.28
CDY53658 Canola plasma membrane 45.0 44.92
CDX86551 Canola plasma membrane 43.15 43.07
CDY30380 Canola plasma membrane, plastid 37.96 42.71
CDY63797 Canola plasma membrane 42.78 42.7
CDY56345 Canola plasma membrane 30.0 36.24
CDY55505 Canola plasma membrane 45.0 30.72
CDY03016 Canola extracellular, golgi, plasma membrane 7.41 30.53
CDY60831 Canola plasma membrane 15.93 25.6
CDY17419 Canola plasma membrane 15.93 25.6
CDY45179 Canola plasma membrane 15.56 25.07
CDY03017 Canola plasma membrane 15.56 25.07
CDY64408 Canola plasma membrane 15.74 24.78
CDY09342 Canola plasma membrane 15.74 24.78
CDX67547 Canola plasma membrane 7.78 24.0
CDX88296 Canola plasma membrane 13.15 23.99
CDX75349 Canola plasma membrane 16.48 23.92
CDX72401 Canola endoplasmic reticulum, plasma membrane 16.3 23.85
CDX68973 Canola endoplasmic reticulum, plasma membrane 16.3 23.66
CDY46118 Canola endoplasmic reticulum, plasma membrane 16.11 23.58
CDY71437 Canola plasma membrane 16.11 23.58
CDY29483 Canola cytosol 2.59 8.64
Protein Annotations
MapMan:18.10.1.4Gene3D:3.50.30.30GO:A0A078DNH5MEROPS:A22.A03EnsemblPlants:CDX90049ProteinID:CDX90049
ProteinID:CDX90049.1GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0005575GO:GO:0016020
GO:GO:0016021GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00150552001InterPro:PA_domainPFAM:PF02225PFAM:PF04258
PANTHER:PTHR12174PANTHER:PTHR12174:SF58InterPro:Peptidase_A22B_SPPInterPro:Preselin/SPPSMART:SM00730SUPFAM:SSF52025
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EE3AE1SEG:seg::
Description
BnaA10g00330D
Coordinates
chrLK031861:-:1421978..1425967
Molecular Weight (calculated)
59801.8 Da
IEP (calculated)
6.825
GRAVY (calculated)
0.505
Length
540 amino acids
Sequence
(BLAST)
001: MMWGRSYSGY LLVLGWLYVY SASLVSGGDI VHHDDSLPNR PGCNNNFVLV KVPTRVNGKE KEEYVGVGAR FGPTLESKEK HATLIRLAVA DPPDCCTTPK
101: FKLTGEVILV HRGNCSFTTK TKVAEAAGAS AIIIINNSTD LFKMVCEKGE DVLDINIPVV MLPLDAGSSL QKFVDANDTV TLQLYSPKRP AVDVAEVFLW
201: LMAVGTILCA SYWSAWTARE EAIEQDKLLK DGSDELLQVS TTSSRGVVEI TVISAILFVV VASCFLIMLY KLMSFWFIEV LVVLFCIGGV EGLQTCLVAL
301: LSCFRWFRSI GEFYVKVPFL GAVSYLTLAI CPFCIVSAVI WAVYRQYSFA WIGQDILGIS LIITVLQIVR VPNLKVGVVL LSCAFMYDIF WVFVSKWWFR
401: ESVMIVVARG DKSGEDGIPM LLKIPRMFDP WGGYSIIGFG DIILPGLLVT FALRYDWLAN KKLKSGYFLG AMSAYGLGLL ITYIALNLMD GHGQPALLYI
501: VPFILGTLIV LGHKRGDLET LWTTGEPERP CPHVRLQPQS
Best Arabidopsis Sequence Match ( AT1G01650.1 )
(BLAST)
001: MILWKSLSCF SFVFGLLLYS ASFVCAGDIV HHDDSLPQRP GCNNNFVLVK VPTRVNGSEY TEYVGVGARF GPTLESKEKH ATLIKLAIAD PPDCCSTPKN
101: KLTGEVILVH RGKCSFTTKT KVAEAAGASA ILIINNSTDL FKMVCEKGEN VLDITIPVVM LPVDAGRSLE NIVKSNAIVT LQLYSPKRPA VDVAEVFLWL
201: MAVGTILCAS YWSAWTVREE AIEQDKLLKD GSDELLQLST TSSRGVVEVT VISAILFVVV ASCFLIMLYK LMSFWFIEVL VVLFCIGGVE GLQTCLVSLL
301: SCFRWFRRFG ESYVKVPFLG AVSYLTLAIC PFCIAFAVFW AVKRQYSYAW IGQDILGISL IITVLQIVRV PNLKVGFVLL SCAFMYDIFW VFVSKWWFRE
401: SVMIVVARGD RSGEDGIPML LKIPRMFDPW GGYSIIGFGD IILPGLLVTF ALRYDWLANK RLKSGYFLGT MSAYGLGLLI TYIALNLMDG HGQPALLYIV
501: PFILGTLFVL GHKRGDLKTL WTTGEPDRPC PHVRLQPQSS
Arabidopsis Description
SPPL4Signal peptide peptidase-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q0WMJ8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.