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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid

Predictor Summary:
  • plastid 5
  • cytosol 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, plastid
Any Predictor:cytosol, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Predotar:plastid
PProwler:plastid
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra037737.1-P Field mustard plastid 73.12 87.1
CDY56345 Canola plasma membrane 66.04 70.92
CDY53660 Canola plasma membrane 40.42 70.29
CDY53658 Canola plasma membrane 77.5 68.76
AT2G43070.4 Thale cress plasma membrane 77.5 61.49
GSMUA_Achr8P16510_001 Banana plasma membrane 44.38 54.06
Solyc09g098200.2.1 Tomato plasma membrane 28.75 52.08
PGSC0003DMT400031075 Potato cytosol, peroxisome, plasma membrane 31.88 50.83
Os11t0433200-02 Rice cytosol, plasma membrane 47.29 49.89
TraesCS7D01G002900.1 Wheat plasma membrane 35.21 49.56
VIT_05s0062g01250.t01 Wine grape plasma membrane 53.33 48.03
CDY55505 Canola plasma membrane 77.08 46.78
KRH46863 Soybean endoplasmic reticulum 51.46 46.6
CDX86551 Canola plasma membrane 52.29 46.4
TraesCS4A01G495400.1 Wheat peroxisome, plasma membrane, vacuole 33.33 46.38
KRH01823 Soybean plasma membrane 51.04 46.23
CDY63797 Canola plasma membrane 52.08 46.21
KRG93116 Soybean plasma membrane 49.38 46.11
OQU81829 Sorghum plasma membrane 50.62 45.51
TraesCS7D01G003100.1 Wheat plasma membrane 50.62 45.42
TraesCS7A01G003000.1 Wheat plasma membrane 50.62 45.42
KRH36351 Soybean plasma membrane 49.17 45.38
TraesCS4A01G495600.2 Wheat plasma membrane 50.21 44.71
GSMUA_Achr11P... Banana plasma membrane 36.46 42.48
HORVU7Hr1G000380.6 Barley plasma membrane 47.08 42.24
PGSC0003DMT400011660 Potato plasma membrane 46.46 41.92
Solyc12g098670.1.1 Tomato plasma membrane 46.25 41.73
GSMUA_AchrUn_... Banana plasma membrane 35.0 40.29
TraesCS7A01G003200.1 Wheat plasma membrane 39.17 38.92
CDY38021 Canola plasma membrane 42.92 38.15
CDX90049 Canola plasma membrane 42.71 37.96
CDY15163 Canola plasma membrane 42.71 37.96
CDY45351 Canola plasma membrane 40.21 35.81
CDY08318 Canola plasma membrane 40.0 35.62
Zm00001d004702_P006 Maize plasma membrane 46.67 29.32
CDX67547 Canola plasma membrane 9.38 25.71
CDX72401 Canola endoplasmic reticulum, plasma membrane 17.92 23.31
CDX75349 Canola plasma membrane 17.92 23.12
CDY71437 Canola plasma membrane 17.71 23.04
CDY46118 Canola endoplasmic reticulum, plasma membrane 17.71 23.04
CDY60831 Canola plasma membrane 16.04 22.92
CDY17419 Canola plasma membrane 16.04 22.92
CDY03017 Canola plasma membrane 15.62 22.39
CDY45179 Canola plasma membrane 15.62 22.39
CDY09342 Canola plasma membrane 15.83 22.16
CDX68973 Canola endoplasmic reticulum, plasma membrane 17.08 22.04
CDX88296 Canola plasma membrane 13.54 21.96
CDY64408 Canola plasma membrane 15.62 21.87
CDY03016 Canola extracellular, golgi, plasma membrane 5.62 20.61
CDY29483 Canola cytosol 2.29 6.79
Protein Annotations
MapMan:18.10.1.4Gene3D:3.50.30.30GO:A0A078GV42UniProt:A0A078GV42EnsemblPlants:CDY30380ProteinID:CDY30380
ProteinID:CDY30380.1GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0005575GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00045072001InterPro:PA_domainPFAM:PF02225PFAM:PF04258PANTHER:PTHR12174PANTHER:PTHR12174:SF58
InterPro:Peptidase_A22B_SPPInterPro:Preselin/SPPSMART:SM00730TMHMM:TMhelixUniParc:UPI0004EF28C9SEG:seg
Description
BnaA04g24810DBnaA04g24810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GV42]
Coordinates
chrLK032253:-:39052..41731
Molecular Weight (calculated)
53769.9 Da
IEP (calculated)
8.804
GRAVY (calculated)
0.583
Length
480 amino acids
Sequence
(BLAST)
001: MILFTLSSHS LTPPRTFHLQ VKVLNWINDV KGSYFTGFGA SLPSKARQSR RLHASLVDPP DSCYILSSRL DGRIALSFRG NCEKAKHAEA AGASALLVIN
101: VDRQRRFLVC VEKDTSLNVT IPVLMISKSS GYALYKSMLE NKSVELLLYA PTRPAVDFAA GLLLLMAVGT VVVGSLWSEL TDPDQANESY SISSKVNHLN
201: FIFVLQEKEI LYISVTGAVF FIVTASVFLL LLFYFMSSWL VLVLIIFFCI VGMQDMHKII MAVLLRKWRH LGRKTVKLPL IGTVSWMSVL VIIICLAFTV
301: FWFVKRHTYY SWVGQDILGI CLMITSLQVV RLPNIKVATV LLCCAFVYDI FWVFISPLIF HESVMIVVAQ GDRSSGESMP MFLRIPRFFD PWGYDKFKKR
401: VVSSGYFLCL TIGYGVGLLL TCLGLYLMDG HGQPALLYIV PCTLGLAVVM GLVRGELKEL WNYGIEATES YTPEDPLPVA
Best Arabidopsis Sequence Match ( AT2G43070.1 )
(BLAST)
001: MSSFDPPNHR YSALVLILLL LGFSVAAADD VSWTEDSSLE SPGCTNKFQM VKVLNWVDGV EGDFLTGLTA QFGAALPSVP DQALRFPAAF VDPLDSCSHL
101: SSRLDGHIAL SIRGNCAFTE KAKHAEAAGA SALLVINDKE DLDEMGCMEK DTSLNVSIPV LMISKSSGDA LNKSMVDNKN VELLLYAPKR PAVDLTAGLL
201: LLMAVGTVVV ASLWSELTDP DQANESYSIL AKDVSSAGTR KDDPEKEILD ISVTGAVFFI VTASIFLLLL FYFMSSWFVW VLTIFFCIGG MQGMHNIIMA
301: VILRKCRHLA RKSVKLPLLG TMSVLSLLVN IVCLAFAVFW FIKRHTSYSW VGQDILGICL MITALQVVRL PNIKVATVLL CCAFVYDIFW VFISPLIFHE
401: SVMIVVAQGD SSTGESIPML LRIPRFFDPW GGYDMIGFGD ILFPGLLISF ASRYDKIKKR VISNGYFLWL TIGYGIGLLL TYLGLYLMDG HGQPALLYIV
501: PCTLGLAVIL GLVRGELKEL WNYGIEESES HTPEDPMPVA
Arabidopsis Description
SPPL3SIGNAL PEPTIDE PEPTIDASE-LIKE 3 [Source:TAIR;Acc:AT2G43070]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.