CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 4
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71437	Canola	plasma membrane	98.64	98.64
CDX72401	Canola	endoplasmic reticulum, plasma membrane	98.1	98.1
Bra037008.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	97.56	97.56
CDX75349	Canola	plasma membrane	93.5	92.74
AT4G33410.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	92.95	92.2
CDX68973	Canola	endoplasmic reticulum, plasma membrane	92.68	91.94
KRG91538	Soybean	endoplasmic reticulum, plasma membrane	82.66	81.99
VIT_16s0050g00580.t01	Wine grape	endoplasmic reticulum, plasma membrane	82.11	81.67
KRH35289	Soybean	endoplasmic reticulum, plasma membrane	82.11	81.45
CDX67547	Canola	plasma membrane	37.67	79.43
Solyc03g025550.2.1	Tomato	plasma membrane	76.69	75.07
PGSC0003DMT400040816	Potato	plasma membrane	71.0	73.6
HORVU7Hr1G059420.1	Barley	plasma membrane	73.71	73.12
Zm00001d049930_P003	Maize	endoplasmic reticulum, plasma membrane, vacuole	73.17	72.78
Os10t0393100-01	Rice	plasma membrane	72.9	72.51
TraesCS7D01G279200.2	Wheat	plasma membrane	72.9	72.31
TraesCS7B01G181000.2	Wheat	plasma membrane	72.9	72.31
TraesCS7A01G280600.1	Wheat	plasma membrane	72.9	72.31
KXG25380	Sorghum	plasma membrane	72.63	72.24
Zm00001d031933_P003	Maize	endoplasmic reticulum, plasma membrane, vacuole	72.36	71.77
GSMUA_Achr3P14450_001	Banana	endoplasmic reticulum, plasma membrane	72.36	71.77
CDY29483	Canola	cytosol	23.58	53.7
CDY03016	Canola	extracellular, golgi, plasma membrane	10.84	30.53
CDX88296	Canola	plasma membrane	24.12	30.07
CDY03017	Canola	plasma membrane	26.83	29.55
CDY45179	Canola	plasma membrane	26.83	29.55
CDY60831	Canola	plasma membrane	26.83	29.46
CDY17419	Canola	plasma membrane	26.56	29.17
CDY64408	Canola	plasma membrane	26.83	28.86
CDY09342	Canola	plasma membrane	26.83	28.86
CDY53660	Canola	plasma membrane	19.51	26.09
CDY30380	Canola	plasma membrane, plastid	23.04	17.71
CDY53658	Canola	plasma membrane	25.2	17.19
CDY15163	Canola	plasma membrane	23.58	16.11
CDX90049	Canola	plasma membrane	23.58	16.11
CDX86551	Canola	plasma membrane	23.04	15.71
CDY63797	Canola	plasma membrane	23.04	15.71
CDY45351	Canola	plasma membrane	22.76	15.58
CDY08318	Canola	plasma membrane	22.76	15.58
CDY38021	Canola	plasma membrane	22.49	15.37
CDY56345	Canola	plasma membrane	14.91	12.3
CDY55505	Canola	plasma membrane	25.2	11.76

Protein Annotations

MapMan:18.10.1.4	GO:A0A078IAA0	UniProt:A0A078IAA0	EnsemblPlants:CDY46118	ProteinID:CDY46118	ProteinID:CDY46118.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00083279001
PFAM:PF04258	PANTHER:PTHR12174	PANTHER:PTHR12174:SF22	InterPro:Peptidase_A22B_SPP	InterPro:Preselin/SPP	SMART:SM00730
TMHMM:TMhelix	UniParc:UPI0004EEA229	:	:	:	:

Description

BnaA03g52500DBnaA03g52500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IAA0]

Coordinates

chrLK032650:-:124595..126546

Molecular Weight (calculated)

40534.3 Da

IEP (calculated)

7.939

GRAVY (calculated)

0.653

Length

369 amino acids

Sequence
(BLAST)

001: MDTLLYLIDP APATLILTAV TVTFASAFRA LNYAKEMERN RDFSEASITL DTSQALMIPV MSSCSLLLMF YLFSSVSQLL TAFTAVASVS SLFFWLSPYA
101: LYVKSQLGLS DPFLSRCCSK SFTRMQGLLL VGCVMTVAAW LVSGHWVLNN LLGISICIAF VSHVRLPNIK TCAMLLVCLF VYDIFWVFFS ERFFGANVMV
201: SVATQQASNP VHTVANSLNL PGLELITKKL ELPVKIVFPR NLLGGVVPGV SASEFMMLGL GDMAIPAMLL ALVLCFDYRK TRDVVNLCDL KSSKGHKYIW
301: YALPGYAIGL VSALAAGVLT HSPQPALLYL VPSTLGPVIF MSWRRKDLAE LWEGPAVSNP IEKSHEVEI

Best Arabidopsis Sequence Match ( AT4G33410.1 )
(BLAST)

001: METLWTLLYL LEPAPATLIV TAVTVTFASA FRALNYGKEM ERNRDFSEAS ITLDSSQALM IPVMSSCSLL LMFYLFSSVS QLLTAFTAIA SVSSLFYWLS
101: PYAVYMKTQL GLSDPFLSRC CSKSFTRIQG LLLVACAMTV VAWLISGHWV LNNLLGISIC IAFVSHVRLP NIKICAMLLV CLFVYDIFWV FFSERFFGAN
201: VMVAVATQQA SNPVHTVANS LNLPGLQLIT KKLELPVKIV FPRNLLGGVV PGVSASDFMM LGLGDMAIPA MLLALVLCFD HRKTRDVVNI FDLKSSKGHK
301: YIWYALPGYA IGLVAALAAG VLTHSPQPAL LYLVPSTLGP VIFMSWRRKD LAELWEGPAL SNPIEKSHEI EI

Arabidopsis Description

SPPL1Signal peptide peptidase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z32]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.