Factsheet for Bra037008.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, endoplasmic reticulum, plastid

Predictor Summary:

nucleus 1
extracellular 2
golgi 2
plasma membrane 4
endoplasmic reticulum 3
vacuole 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71437	Canola	plasma membrane	97.83	97.83
CDY46118	Canola	endoplasmic reticulum, plasma membrane	97.56	97.56
AT4G33410.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	91.6	90.86
Bra011437.1-P	Field mustard	endoplasmic reticulum, plasma membrane	91.6	90.86
Bra036397.1-P	Field mustard	plasma membrane	34.69	87.67
KRG91538	Soybean	endoplasmic reticulum, plasma membrane	81.84	81.18
KRH35289	Soybean	endoplasmic reticulum, plasma membrane	81.3	80.65
VIT_16s0050g00580.t01	Wine grape	endoplasmic reticulum, plasma membrane	81.03	80.59
Solyc03g025550.2.1	Tomato	plasma membrane	75.88	74.27
TraesCS7D01G279200.2	Wheat	plasma membrane	73.44	72.85
TraesCS7B01G181000.2	Wheat	plasma membrane	73.44	72.85
HORVU7Hr1G059420.1	Barley	plasma membrane	73.44	72.85
PGSC0003DMT400040816	Potato	plasma membrane	70.19	72.75
TraesCS7A01G280600.1	Wheat	plasma membrane	73.17	72.58
Zm00001d049930_P003	Maize	endoplasmic reticulum, plasma membrane, vacuole	72.9	72.51
KXG25380	Sorghum	plasma membrane	72.36	71.97
Os10t0393100-01	Rice	plasma membrane	72.36	71.97
Zm00001d031933_P003	Maize	endoplasmic reticulum, plasma membrane, vacuole	72.09	71.51
GSMUA_Achr3P14450_001	Banana	endoplasmic reticulum, plasma membrane	71.82	71.24
Bra025596.1-P	Field mustard	plasma membrane	38.48	61.74
Bra017402.1-P	Field mustard	golgi, plasma membrane	13.55	31.85
Bra024788.1-P	Field mustard	plasma membrane	26.29	28.96
Bra026567.1-P	Field mustard	plasma membrane	26.29	28.28
Bra033245.1-P	Field mustard	plasma membrane	23.31	17.41
Bra037737.1-P	Field mustard	plastid	18.7	17.12
Bra004741.1-P	Field mustard	plasma membrane	24.93	17.01
Bra030626.1-P	Field mustard	plasma membrane	22.76	15.53
Bra027793.1-P	Field mustard	plasma membrane	22.49	15.4
Bra032646.1-P	Field mustard	plasma membrane	22.22	15.21

Protein Annotations

MapMan:18.10.1.4	EnsemblPlantsGene:Bra037008	EnsemblPlants:Bra037008.1	EnsemblPlants:Bra037008.1-P	GO:GO:0003674	GO:GO:0003824
GO:GO:0004190	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	UniProt:M4F7E8	PFAM:PF04258	PANTHER:PTHR12174
PANTHER:PTHR12174:SF22	InterPro:Peptidase_A22B_SPP	InterPro:Preselin/SPP	SMART:SM00730	TMHMM:TMhelix	UniParc:UPI00025410E3
SEG:seg	:	:	:	:	:

Description

AT4G33410 (E=3e-192) | signal peptide peptidase family protein

Coordinates

chrA03:+:28988811..28990111

Molecular Weight (calculated)

40522.2 Da

IEP (calculated)

7.990

GRAVY (calculated)

0.654

Length

369 amino acids

Sequence
(BLAST)

001: MDTLLYLIDP PPATLIVTAV SVAFASAFRA LNYAKEMERN RDFSEASITL DTSQALMIPV MSSCSLLLMF YLFSSVSQLL TAFTAVASVS SLFFWLSPYA
101: LYVKSQLGLS DPFLSRCCSK SFTRMQGLLL VGCVMTVAAW LVSGHWVLNN LLGISICIAF VSHVRLPNIK TCAMLLVCLF VYDIFWVFFS ERFFGANVMV
201: SVATQQASNP VHTVANSLNL PGLELITKKL ELPVKIVFPR NLLGGVVPGV SASEFMMLGL GDMAIPAMLL ALVLCFDYRK SREVVNLFDL KSSKGHKYIW
301: YALPGYAIGL VSALAAGVLT HSPQPALLYL VPSTLGPVIF MSWRRKDLAE LWDGPAVSNS IEKSHEVEI

Best Arabidopsis Sequence Match ( AT4G33410.1 )
(BLAST)

001: METLWTLLYL LEPAPATLIV TAVTVTFASA FRALNYGKEM ERNRDFSEAS ITLDSSQALM IPVMSSCSLL LMFYLFSSVS QLLTAFTAIA SVSSLFYWLS
101: PYAVYMKTQL GLSDPFLSRC CSKSFTRIQG LLLVACAMTV VAWLISGHWV LNNLLGISIC IAFVSHVRLP NIKICAMLLV CLFVYDIFWV FFSERFFGAN
201: VMVAVATQQA SNPVHTVANS LNLPGLQLIT KKLELPVKIV FPRNLLGGVV PGVSASDFMM LGLGDMAIPA MLLALVLCFD HRKTRDVVNI FDLKSSKGHK
301: YIWYALPGYA IGLVAALAAG VLTHSPQPAL LYLVPSTLGP VIFMSWRRKD LAELWEGPAL SNPIEKSHEI EI

Arabidopsis Description

SPPL1Signal peptide peptidase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z32]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.