Factsheet for Bra025596.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
golgi 6
plasma membrane 9
endoplasmic reticulum 5
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036397.1-P	Field mustard	plasma membrane	58.7	92.47
CDX67547	Canola	plasma membrane	68.7	90.29
Bra011437.1-P	Field mustard	endoplasmic reticulum, plasma membrane	65.22	40.32
Bra037008.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	61.74	38.48
AT4G33410.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	61.74	38.17
KRH35289	Soybean	endoplasmic reticulum, plasma membrane	56.52	34.95
KRG91538	Soybean	endoplasmic reticulum, plasma membrane	56.52	34.95
VIT_16s0050g00580.t01	Wine grape	endoplasmic reticulum, plasma membrane	55.65	34.5
PGSC0003DMT400040816	Potato	plasma membrane	53.04	34.27
Zm00001d049930_P003	Maize	endoplasmic reticulum, plasma membrane, vacuole	54.35	33.69
Zm00001d031933_P003	Maize	endoplasmic reticulum, plasma membrane, vacuole	54.35	33.6
KXG25380	Sorghum	plasma membrane	53.91	33.42
Os10t0393100-01	Rice	plasma membrane	53.48	33.15
Solyc03g025550.2.1	Tomato	plasma membrane	53.48	32.63
GSMUA_Achr3P14450_001	Banana	endoplasmic reticulum, plasma membrane	52.61	32.53
HORVU7Hr1G059420.1	Barley	plasma membrane	51.74	31.99
TraesCS7A01G280600.1	Wheat	plasma membrane	51.3	31.72
TraesCS7B01G181000.2	Wheat	plasma membrane	51.3	31.72
TraesCS7D01G279200.2	Wheat	plasma membrane	51.3	31.72
Bra017402.1-P	Field mustard	golgi, plasma membrane	10.87	15.92
Bra037737.1-P	Field mustard	plastid	22.61	12.9
Bra024788.1-P	Field mustard	plasma membrane	18.7	12.84
Bra026567.1-P	Field mustard	plasma membrane	18.7	12.54
Bra004741.1-P	Field mustard	plasma membrane	23.91	10.17
Bra033245.1-P	Field mustard	plasma membrane	20.87	9.72
Bra032646.1-P	Field mustard	plasma membrane	20.87	8.91
Bra027793.1-P	Field mustard	plasma membrane	20.43	8.72
Bra030626.1-P	Field mustard	plasma membrane	20.43	8.69

Protein Annotations

MapMan:18.10.1.4	EnsemblPlantsGene:Bra025596	EnsemblPlants:Bra025596.1	EnsemblPlants:Bra025596.1-P	InterPro:EXS_C	GO:GO:0003674
GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	InterPro:IPR004342	UniProt:M4E9Y9
PFAM:PF03124	PFAM:PF04258	PANTHER:PTHR12174	PANTHER:PTHR12174:SF22	InterPro:Peptidase_A22B_SPP	TMHMM:TMhelix
UniParc:UPI0002544D1E	SEG:seg	:	:	:	:

Description

AT4G33410 (E=2e-061) | signal peptide peptidase family protein

Coordinates

chrA04:-:7613316..7614334

Molecular Weight (calculated)

26156.7 Da

IEP (calculated)

6.780

GRAVY (calculated)

0.676

Length

230 amino acids

Sequence
(BLAST)

001: MQGLLLVACA VTVVAWLVSG HWVLNNLLGI SICIAFVSHV RLPNIKICTM LLLCLFVYDI FWVFFSERFF GANVMVTVAT QQALNPVHTV ANSLNLPGLE
101: LITKKLELPV KIMFPRNLLG GVEPGVSASE FMMLGLGDMI GWESVMKMGQ DTRELFFYET FQYYNPLLLI TMMVWLWGVN LWVFSRTGVD YAAIFYLGPD
201: HHSHKEIWKV LQFLSYLPSL SNDFLKPIIL

Best Arabidopsis Sequence Match ( AT4G33410.1 )
(BLAST)

001: METLWTLLYL LEPAPATLIV TAVTVTFASA FRALNYGKEM ERNRDFSEAS ITLDSSQALM IPVMSSCSLL LMFYLFSSVS QLLTAFTAIA SVSSLFYWLS
101: PYAVYMKTQL GLSDPFLSRC CSKSFTRIQG LLLVACAMTV VAWLISGHWV LNNLLGISIC IAFVSHVRLP NIKICAMLLV CLFVYDIFWV FFSERFFGAN
201: VMVAVATQQA SNPVHTVANS LNLPGLQLIT KKLELPVKIV FPRNLLGGVV PGVSASDFMM LGLGDMAIPA MLLALVLCFD HRKTRDVVNI FDLKSSKGHK
301: YIWYALPGYA IGLVAALAAG VLTHSPQPAL LYLVPSTLGP VIFMSWRRKD LAELWEGPAL SNPIEKSHEI EI

Arabidopsis Description

SPPL1Signal peptide peptidase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z32]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.