Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG91538 | Soybean | endoplasmic reticulum, plasma membrane | 97.31 | 97.31 |
| VIT_16s0050g00580.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 85.48 | 85.71 |
| AT4G33410.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 82.26 | 82.26 |
| CDY46118 | Canola | endoplasmic reticulum, plasma membrane | 81.45 | 82.11 |
| CDY71437 | Canola | plasma membrane | 81.45 | 82.11 |
| CDX75349 | Canola | plasma membrane | 81.72 | 81.72 |
| CDX72401 | Canola | endoplasmic reticulum, plasma membrane | 80.91 | 81.57 |
| Bra037008.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid | 80.65 | 81.3 |
| Bra011437.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 81.18 | 81.18 |
| CDX68973 | Canola | endoplasmic reticulum, plasma membrane | 80.65 | 80.65 |
| Bra036397.1-P | Field mustard | plasma membrane | 31.18 | 79.45 |
| Solyc03g025550.2.1 | Tomato | plasma membrane | 79.3 | 78.25 |
| PGSC0003DMT400040816 | Potato | plasma membrane | 73.12 | 76.4 |
| Zm00001d049930_P003 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 75.81 | 76.01 |
| Zm00001d031933_P003 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 75.54 | 75.54 |
| KXG25380 | Sorghum | plasma membrane | 75.27 | 75.47 |
| HORVU7Hr1G059420.1 | Barley | plasma membrane | 74.19 | 74.19 |
| Os10t0393100-01 | Rice | plasma membrane | 73.66 | 73.85 |
| TraesCS7B01G181000.2 | Wheat | plasma membrane | 73.39 | 73.39 |
| TraesCS7A01G280600.1 | Wheat | plasma membrane | 73.39 | 73.39 |
| TraesCS7D01G279200.2 | Wheat | plasma membrane | 73.39 | 73.39 |
| GSMUA_Achr3P14450_001 | Banana | endoplasmic reticulum, plasma membrane | 73.12 | 73.12 |
| CDX67547 | Canola | plasma membrane | 34.14 | 72.57 |
| Bra025596.1-P | Field mustard | plasma membrane | 34.95 | 56.52 |
| CDY29483 | Canola | cytosol | 21.51 | 49.38 |
| KRH77554 | Soybean | extracellular, golgi | 15.32 | 33.53 |
| KRH52673 | Soybean | plasma membrane | 27.69 | 30.21 |
| KRH62014 | Soybean | endoplasmic reticulum | 27.69 | 30.21 |
| KRH16232 | Soybean | plasma membrane | 26.61 | 29.03 |
| KRH27921 | Soybean | plasma membrane | 24.73 | 16.94 |
| KRG93116 | Soybean | plasma membrane | 23.39 | 16.93 |
| KRH36351 | Soybean | plasma membrane | 23.66 | 16.92 |
| KRH48125 | Soybean | plasma membrane | 23.92 | 16.45 |
| KRH65010 | Soybean | plasma membrane | 23.92 | 16.42 |
| KRH46863 | Soybean | endoplasmic reticulum | 23.39 | 16.42 |
| KRH01823 | Soybean | plasma membrane | 23.12 | 16.23 |
| KRH00766 | Soybean | plasma membrane | 23.12 | 15.96 |
| KRH40447 | Soybean | plasma membrane | 22.85 | 15.77 |
| KRH54524 | Soybean | plasma membrane | 8.87 | 13.04 |
| KRH66530 | Soybean | golgi, plasma membrane, plastid | 5.65 | 10.71 |
| KRH77552 | Soybean | plasma membrane | 9.41 | 9.38 |
| KRH61017 | Soybean | cytosol | 9.68 | 4.62 |
Protein Annotations
| EntrezGene:100786631 | MapMan:18.10.1.4 | MEROPS:A22.A14 | EMBL:ACUP02006662 | EMBL:BT093883 | UniProt:C6T8T0 |
| EnsemblPlantsGene:GLYMA_10G234200 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005764 | GO:GO:0005765 | GO:GO:0005773 | GO:GO:0005783 |
| GO:GO:0005794 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030660 | GO:GO:0071458 | GO:GO:0071556 | EnsemblPlants:KRH35289 |
| ProteinID:KRH35289 | ProteinID:KRH35289.1 | PFAM:PF04258 | PANTHER:PTHR12174 | PANTHER:PTHR12174:SF22 | InterPro:Peptidase_A22B_SPP |
| InterPro:Preselin/SPP | SMART:SM00730 | TMHMM:TMhelix | UniParc:UPI0001B162F2 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr10:-:46331672..46335217
Molecular Weight (calculated)
41065.1 Da
IEP (calculated)
7.706
GRAVY (calculated)
0.670
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MMESLWKLLY LLEPAPVTLI ITAVAVTFGA AFRALNYGKE MEHNRDLCEA SITLDRSQAL MIPVMSSFSL LLMFYLFSSV SQLLTAFTAV ASASSLFFCL
101: SPYVAYLKAQ FGLADPFVSR CCSKSFTRLQ AILLLVCSFT VAAWLVSGHW ILNNLLGISI CIAFVSHVRL PNIKICAMLL VCLFVYDIFW VFFSERFFGA
201: NVMVSVATQQ ASNPVHTVAN SIGLPGLQLI TKKLELPVKI VFPRNLLGGV VPGENAADFM MLGLGDMAIP GMLLALVLCF DYRKSRDTVN LLELHSSKGH
301: KYIWYALPGY AIGLVTALAA GVLTHSPQPA LLYLVPSTLG PVVVISWMKR ELFELWEGNT PNLNDKDREI EV
101: SPYVAYLKAQ FGLADPFVSR CCSKSFTRLQ AILLLVCSFT VAAWLVSGHW ILNNLLGISI CIAFVSHVRL PNIKICAMLL VCLFVYDIFW VFFSERFFGA
201: NVMVSVATQQ ASNPVHTVAN SIGLPGLQLI TKKLELPVKI VFPRNLLGGV VPGENAADFM MLGLGDMAIP GMLLALVLCF DYRKSRDTVN LLELHSSKGH
301: KYIWYALPGY AIGLVTALAA GVLTHSPQPA LLYLVPSTLG PVVVISWMKR ELFELWEGNT PNLNDKDREI EV
001: METLWTLLYL LEPAPATLIV TAVTVTFASA FRALNYGKEM ERNRDFSEAS ITLDSSQALM IPVMSSCSLL LMFYLFSSVS QLLTAFTAIA SVSSLFYWLS
101: PYAVYMKTQL GLSDPFLSRC CSKSFTRIQG LLLVACAMTV VAWLISGHWV LNNLLGISIC IAFVSHVRLP NIKICAMLLV CLFVYDIFWV FFSERFFGAN
201: VMVAVATQQA SNPVHTVANS LNLPGLQLIT KKLELPVKIV FPRNLLGGVV PGVSASDFMM LGLGDMAIPA MLLALVLCFD HRKTRDVVNI FDLKSSKGHK
301: YIWYALPGYA IGLVAALAAG VLTHSPQPAL LYLVPSTLGP VIFMSWRRKD LAELWEGPAL SNPIEKSHEI EI
101: PYAVYMKTQL GLSDPFLSRC CSKSFTRIQG LLLVACAMTV VAWLISGHWV LNNLLGISIC IAFVSHVRLP NIKICAMLLV CLFVYDIFWV FFSERFFGAN
201: VMVAVATQQA SNPVHTVANS LNLPGLQLIT KKLELPVKIV FPRNLLGGVV PGVSASDFMM LGLGDMAIPA MLLALVLCFD HRKTRDVVNI FDLKSSKGHK
301: YIWYALPGYA IGLVAALAAG VLTHSPQPAL LYLVPSTLGP VIFMSWRRKD LAELWEGPAL SNPIEKSHEI EI
Arabidopsis Description
SPPL1Signal peptide peptidase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z32]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.