CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40447	Soybean	plasma membrane	97.96	97.96
KRH48125	Soybean	plasma membrane	87.38	87.06
KRH65010	Soybean	plasma membrane	86.64	86.16
VIT_15s0046g02460.t01	Wine grape	plasma membrane	78.85	79.59
KRH77554	Soybean	extracellular, golgi	25.05	79.41
Bra033245.1-P	Field mustard	plasma membrane	68.65	74.9
GSMUA_Achr4P12000_001	Banana	plasma membrane	72.91	74.01
Solyc01g094680.2.1	Tomato	plasma membrane	73.84	73.84
CDX90049	Canola	plasma membrane	72.73	72.59
CDY15163	Canola	plasma membrane	72.54	72.41
Solyc10g012430.2.1	Tomato	plasma membrane	72.73	72.32
AT1G01650.1	Thale cress	plasma membrane	72.36	72.22
CDY38021	Canola	plasma membrane	72.17	72.04
GSMUA_Achr10P...	Banana	plasma membrane	70.87	71.8
VIT_02s0012g02640.t01	Wine grape	golgi, plasma membrane, plastid	19.85	71.33
Bra032646.1-P	Field mustard	plasma membrane	71.24	71.24
KRH27921	Soybean	plasma membrane	70.69	70.17
Zm00001d014901_P001	Maize	plasma membrane	69.2	69.59
EER90450	Sorghum	plasma membrane	69.2	69.59
Os02t0823000-01	Rice	plasma membrane	69.76	68.99
Os06t0730900-01	Rice	plasma membrane	68.83	68.45
EES06047	Sorghum	plasma membrane	69.39	68.37
TraesCS6A01G406000.1	Wheat	plasma membrane	68.83	67.95
TraesCS6B01G451100.1	Wheat	plasma membrane	68.65	67.77
TraesCS6D01G389600.1	Wheat	plasma membrane	68.65	67.77
Zm00001d051873_P002	Maize	plasma membrane	67.16	66.06
KRH77552	Soybean	plasma membrane	45.27	65.42
TraesCS7D01G543700.1	Wheat	plasma membrane	65.68	64.48
TraesCS7A01G568900.1	Wheat	plasma membrane	65.86	62.83
TraesCS7B01G489700.3	Wheat	plasma membrane, vacuole	65.49	61.71
KRH54524	Soybean	plasma membrane	28.2	60.08
HORVU7Hr1G122650.3	Barley	nucleus, plasma membrane	65.86	58.1
TraesCS4D01G010500.1	Wheat	plasma membrane	48.05	55.34
KRH66530	Soybean	golgi, plasma membrane, plastid	19.85	54.59
KRH46863	Soybean	endoplasmic reticulum	46.94	47.74
KRG93116	Soybean	plasma membrane	44.9	47.08
KRH01823	Soybean	plasma membrane	46.2	46.98
KRH36351	Soybean	plasma membrane	45.08	46.73
KRH52673	Soybean	plasma membrane	15.4	24.34
KRH62014	Soybean	endoplasmic reticulum	15.4	24.34
KRH16232	Soybean	plasma membrane	15.03	23.75
KRH61017	Soybean	cytosol	33.77	23.36
KRH35289	Soybean	endoplasmic reticulum, plasma membrane	15.96	23.12
KRG91538	Soybean	endoplasmic reticulum, plasma membrane	15.58	22.58

Protein Annotations

EntrezGene:100808921	MapMan:18.10.1.4	Gene3D:3.50.30.30	MEROPS:A22.A05	EMBL:ACUP02011472	ncoils:Coil
EnsemblPlantsGene:GLYMA_18G233600	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005764	GO:GO:0005765	GO:GO:0005773	GO:GO:0005783
GO:GO:0005794	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019538	GO:GO:0030660	GO:GO:0071458	GO:GO:0071556	UniProt:I1N3R1
EnsemblPlants:KRH00766	ProteinID:KRH00766	ProteinID:KRH00766.1	InterPro:PA_domain	PFAM:PF02225	PFAM:PF04258
PANTHER:PTHR12174	PANTHER:PTHR12174:SF58	InterPro:Peptidase_A22B_SPP	InterPro:Preselin/SPP	SMART:SM00730	SUPFAM:SSF52025
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000233E2C1	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:52223382..52231381

Molecular Weight (calculated)

59583.2 Da

IEP (calculated)

6.411

GRAVY (calculated)

0.489

Length

539 amino acids

Sequence
(BLAST)

001: MVSLGATCAL CCSMFMVFVT LSLAGDIVHP DSIAPRRPGC DNNFVLVKVP TWIDGVESCE YVGVGARFGP TLESKEKHAN HTRVAIADPP DCCSKPKNKL
101: TGEIILVHRG QCSFTTKANI AEEAGASAIL IINYRTELFK MVCEANETDV DIGIPAVMLP QDAGENLKNH ILNNSVVSVQ LYSPLRPLVD VAEVFLWLMA
201: VGTILCASYW SAWTARESAI EQEKLLKDAS DEYINAENAG SSAYVEISTA AAISFVVIAS CFLVMLYKLM AYWFVEVLVV LFCIGGVEGL QTCLVALLSC
301: FKWFQHAAQT FVKVPFFGAV SYLTVAVTPF CIVFAVLWGV YRRVSFAWIG QDILGITLII TVLQIVRIPN LKVGTVLLSC AFLYDIFWVF VSKWWFHESV
401: MIVVARGDRS GEDGIPMLLK IPRMFDPWGG YSIIGFGDII LPGLLVAFSL RYDWLAKKNL RDGYFLWAMT AYGLGLLITY VALNLMDGHG QPALLYIVPF
501: TLGTFLSLGK KRGELKVLWT RGEPKIPCPH IQENQSTNQ

Best Arabidopsis Sequence Match ( AT1G01650.1 )
(BLAST)

001: MILWKSLSCF SFVFGLLLYS ASFVCAGDIV HHDDSLPQRP GCNNNFVLVK VPTRVNGSEY TEYVGVGARF GPTLESKEKH ATLIKLAIAD PPDCCSTPKN
101: KLTGEVILVH RGKCSFTTKT KVAEAAGASA ILIINNSTDL FKMVCEKGEN VLDITIPVVM LPVDAGRSLE NIVKSNAIVT LQLYSPKRPA VDVAEVFLWL
201: MAVGTILCAS YWSAWTVREE AIEQDKLLKD GSDELLQLST TSSRGVVEVT VISAILFVVV ASCFLIMLYK LMSFWFIEVL VVLFCIGGVE GLQTCLVSLL
301: SCFRWFRRFG ESYVKVPFLG AVSYLTLAIC PFCIAFAVFW AVKRQYSYAW IGQDILGISL IITVLQIVRV PNLKVGFVLL SCAFMYDIFW VFVSKWWFRE
401: SVMIVVARGD RSGEDGIPML LKIPRMFDPW GGYSIIGFGD IILPGLLVTF ALRYDWLANK RLKSGYFLGT MSAYGLGLLI TYIALNLMDG HGQPALLYIV
501: PFILGTLFVL GHKRGDLKTL WTTGEPDRPC PHVRLQPQSS

Arabidopsis Description

SPPL4Signal peptide peptidase-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q0WMJ8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.