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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:peroxisome, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:peroxisome
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
plasma membrane: 18260611
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G389600.1 Wheat plasma membrane 86.24 86.08
TraesCS6A01G406000.1 Wheat plasma membrane 86.06 85.9
TraesCS6B01G451100.1 Wheat plasma membrane 85.87 85.71
EES06047 Sorghum plasma membrane 82.94 82.63
Os06t0730900-01 Rice plasma membrane 80.73 81.18
GSMUA_Achr4P12000_001 Banana plasma membrane 77.98 80.04
Zm00001d051873_P002 Maize plasma membrane 79.82 79.38
GSMUA_Achr10P... Banana plasma membrane 75.05 76.88
VIT_02s0012g02640.t01 Wine grape golgi, plasma membrane, plastid 20.37 74.0
VIT_15s0046g02460.t01 Wine grape plasma membrane 71.38 72.85
KRH77554 Soybean extracellular, golgi 22.57 72.35
VIT_02s0025g03400.t01 Wine grape plasma membrane 72.11 71.72
Bra033245.1-P Field mustard plasma membrane 64.59 71.26
Solyc08g081180.2.1 Tomato plasma membrane 70.28 70.4
PGSC0003DMT400032136 Potato plasma membrane 70.09 70.22
KRH40447 Soybean plasma membrane 69.17 69.94
KRH00766 Soybean plasma membrane 68.99 69.76
CDY45351 Canola plasma membrane 68.81 69.57
Bra027793.1-P Field mustard plasma membrane 68.81 69.57
KRH48125 Soybean plasma membrane 68.99 69.5
AT1G63690.1 Thale cress plasma membrane 68.81 69.44
CDY08318 Canola plasma membrane 68.44 69.2
KRH65010 Soybean plasma membrane 68.62 69.0
CDX90049 Canola plasma membrane 67.71 68.33
CDY15163 Canola plasma membrane 67.71 68.33
CDY38021 Canola plasma membrane 66.97 67.59
KRH27921 Soybean plasma membrane 67.16 67.4
Bra032646.1-P Field mustard plasma membrane 66.61 67.35
Solyc01g094680.2.1 Tomato plasma membrane 66.06 66.79
AT1G01650.1 Thale cress plasma membrane 66.06 66.67
Solyc10g012430.2.1 Tomato plasma membrane 65.5 65.87
TraesCS4D01G010500.1 Wheat plasma membrane 56.51 65.81
KRH77552 Soybean plasma membrane 43.67 63.81
KRH54524 Soybean plasma membrane 26.79 57.71
KRH66530 Soybean golgi, plasma membrane, plastid 19.63 54.59
Os11t0433200-02 Rice cytosol, plasma membrane 42.94 51.43
Os01t0914700-01 Rice plasma membrane 39.27 40.92
Os05t0436400-03 Rice plasma membrane 13.76 26.22
Os10t0393100-01 Rice plasma membrane 16.88 24.8
Os02t0117400-01 Rice plasma membrane 15.23 24.2
KRH61017 Soybean cytosol 31.93 22.34
Os02t0823100-01 Rice plasma membrane 3.85 7.29
Protein Annotations
MapMan:18.10.1.4Gene3D:3.50.30.30EntrezGene:4331193MEROPS:A22.A05EMBL:AK122065ProteinID:BAD22919.1
ProteinID:BAF10479.1ProteinID:BAS81654.1ProteinID:EEE58070.1GO:GO:0003674GO:GO:0003824GO:GO:0004190
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005764GO:GO:0005765
GO:GO:0005768GO:GO:0005773GO:GO:0005783GO:GO:0005794GO:GO:0006508GO:GO:0008150
GO:GO:0008152GO:GO:0010008GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0019538
GO:GO:0030660GO:GO:0071458GO:GO:0071556EnsemblPlantsGene:Os02g0823000EnsemblPlants:Os02t0823000-01InterPro:PA_domain
PFAM:PF02225PFAM:PF04258PANTHER:PTHR12174PANTHER:PTHR12174:SF61InterPro:Peptidase_A22B_SPPInterPro:Preselin/SPP
UniProt:Q0DWA9SMART:SM00730SUPFAM:SSF52025SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0000DF08FA
RefSeq:XP_015625571.1SEG:seg::::
Description
SPPL4Peptidase A22B, signal peptide peptidase domain containing protein. (Os02t0823000-01)
Coordinates
chr2:+:35341752..35347359
Molecular Weight (calculated)
59888.7 Da
IEP (calculated)
6.502
GRAVY (calculated)
0.403
Length
545 amino acids
Sequence
(BLAST)
001: MGTSSPEMAA ALLLVMAALA GVAAGGDIVH QDDEAPKIPG CSNDFVLVKV QTWVNNREDG EFVGVGARFG PTIESKEKHA NRTGLLLADP IDCCDPPTQK
101: VAGDVLLVQR GNCKFTKKAK NAEAAGASAI IIINHVHELY KMVCDRNETD LDINIPAVLL PKDAGNDLQK LLTRGKVSVQ LYSPDRPLVD TAEVFLWLMA
201: VGTILCASYW SAWSAREAVI EQEKLLKDGH ESSLNLEAGG SSGMVDINMT SAILFVVIAS CFLIMLYKLM SHWFVELLVV IFCIGGVEGL QTCLVALLSR
301: WFKPAAESFV KVPFFGAVSY LTIAVCPFCI VFAVIWAVYR RMTYAWIGQD ILGIALIVTV IQIVRIPNLK VGSVLLSCSF LYDIFWVFIS KMWFHESVMI
401: VVARGDKTDE DGVPMLLKIP RMFDPWGGFS IIGFGDILLP GLLIAFALRY DWAAKKTLQS GYFLWSMVAY GSGLMITYVA LNLMDGHGQP ALLYIVPFTL
501: GTFIALGRKR GELRNLWTRG QPERVCTHMH MQPSPKDTNC DAVSS
Best Arabidopsis Sequence Match ( AT1G63690.1 )
(BLAST)
001: MDSLRFLRIL LLSSSILLLS LRSTVTAGDI VHQDNLAPKK PGCENDFVLV KVQTWIDGVE NEEFVGVGAR FGKRIVSKEK NANQTHLVFA NPRDSCTPLK
101: NKLSGDVVIV ERGNCRFTAK ANNAEAAGAS ALLIINNQKE LYKMVCEPDE TDLDIQIPAV MLPQDAGASL QKMLANSSKV SAQLYSPRRP AVDVAEVFLW
201: LMAIGTILCA SYWSAWSARE AAIEHDKLLK DAIDEIPNTN DGGSGVVEIN SISAIFFVVL ASGFLVILYK LMSYWFVELL VVVFCIGGVE GLQTCLVALL
301: SRWFQRAADT YVKVPFLGPI SYLTLAVSPF CIVFAVLWAV YRVHSFAWIG QDVLGIALII TVLQIVHVPN LKVGTVLLSC AFLYDIFWVF VSKKLFHESV
401: MIVVARGDKS GEDGIPMLLK IPRMFDPWGG YSIIGFGDIL LPGLLIAFAL RYDWLANKTL RTGYFIWAMV AYGLGLLITY VALNLMDGHG QPALLYIVPF
501: TLGTMLTLAR KRDDLWILWT KGEPERACPH HVRLEQCSEK
Arabidopsis Description
SPPL2Signal peptide peptidase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W469]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.