Factsheet for Os02t0823100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 18557835
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18557835 doi

SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis

Department of Biology Area 9, University of York, York YO10 5DD, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0433200-02	Rice	cytosol, plasma membrane	7.29	4.62
Os05t0436400-03	Rice	plasma membrane	4.51	4.55
Os02t0117400-01	Rice	plasma membrane	4.86	4.08
Os06t0730900-01	Rice	plasma membrane	7.29	3.87
Os02t0823000-01	Rice	plasma membrane	7.29	3.85
Os10t0393100-01	Rice	plasma membrane	4.86	3.77
Os01t0914700-01	Rice	plasma membrane	5.56	3.06
GSMUA_Achr8P16520_001	Banana	endoplasmic reticulum, extracellular	0.35	0.58

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	EntrezGene:4331194	EMBL:AK102174	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
ProteinID:BAA32081.1	ProteinID:BAA81820.1	ProteinID:BAD22920.1	ProteinID:BAF10480.1	ProteinID:BAS81656.1	ProteinID:EAZ25130.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887
GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020
GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS
EnsemblPlantsGene:Os02g0823100	EnsemblPlants:Os02t0823100-01	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF262	UniProt:Q9SXF8	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI00003B04AC
RefSeq:XP_015625572.1	SEG:seg	:	:	:	:

Description

PLASMA MEMBRANE INTRINSIC PROTEIN 1;3Similar to Plasma membrane intrinsic protein (Plasma membrane integral protein ZmPIP1-5). (Os02t0823100-01)

Coordinates

chr2:+:35349673..35351221

Molecular Weight (calculated)

30758.4 Da

IEP (calculated)

8.835

GRAVY (calculated)

0.398

Length

288 amino acids

Sequence
(BLAST)

001: MEGKEEDVRL GANRYTERQP IGTAAQGAEE KDYREPPAAP VFEVEELTSW SFYRAGIAEF VATFLFLYIS ILTVMGVNKS ASKCATVGIQ GIAWSFGGMI
101: FALVYCTAGI SGGHINPAVT FGLFLARKLS LTRAVFYMAM QCLGAICGAG VVKGFQRGLY MGSGGGANAV NPGYTKGDGL GAEIVGTFVL VYTVFSATDA
201: KRNARDSHVP ILAPLPIGFA VFLVHLATIP ITGTGINPAR SLGAAIVYNR AHAWHDHWIF WVGPFIGAAL AAIYHVVVIR AIPFKSRD

Best Arabidopsis Sequence Match ( AT4G00430.1 )
(BLAST)

001: MEGKEEDVRV GANKFPERQP IGTSAQSTDK DYKEPPPAPL FEPGELSSWS FYRAGIAEFI ATFLFLYITV LTVMGVKRAP NMCASVGIQG IAWAFGGMIF
101: ALVYCTAGIS GGHINPAVTF GLFLARKLSL TRAVFYMIMQ CLGAICGAGV VKGFQPTPYQ TLGGGANTVA HGYTKGSGLG AEIIGTFVLV YTVFSATDAK
201: RSARDSHVPI LAPLPIGFAV FLVHLATIPI TGTGINPARS LGAAIIYNKD HSWDDHWIFW VGPFIGAALA ALYHQIVIRA IPFKSKS

Arabidopsis Description

PIP1.4TMP-C [Source:UniProtKB/TrEMBL;Acc:A0A178USZ7]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.