Factsheet for Os02t0117400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 8
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

endoplasmic reticulum: 19688213

plasma membrane: 18260611
plasma membrane: 28056797

gfp PMID: 19688213 doi

T Tamura, M Kuroda, T Oikawa, J Kyozuka, K Terauchi, Y Ishimaru, K Abe, T Asakura

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0200500-01
Os02t0643000-01
Os04t0534400-01
Os05t0520100-00
Os08t0156700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G03120.1	Os01t0200500-01	AT3G16310.1	21798944
AT2G03120.1	Os05t0520100-00	AT3G16310.1	21798944
AT2G03120.1	Os02t0643000-01	AT3G60600.1	21798944
AT2G03120.1	Os04t0534400-01	AT3G60600.1	21798944
AT2G03120.1	Os08t0156700-01	AT3G60600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0436400-03	Rice	plasma membrane	81.05	97.2
EES04366	Sorghum	golgi, plasma membrane	89.21	88.95
TraesCS3B01G545500.1	Wheat	plasma membrane	88.63	88.37
TraesCS3D01G492200.1	Wheat	plasma membrane	88.34	88.08
HORVU6Hr1G009670.1	Barley	plasma membrane	87.46	87.72
TraesCS6B01G064500.2	Wheat	plasma membrane	87.17	87.68
TraesCSU01G107100.2	Wheat	plasma membrane	87.17	87.43
TraesCS6A01G048100.2	Wheat	plasma membrane	86.88	87.13
TraesCS6B01G064600.2	Wheat	plasma membrane	86.59	87.1
Zm00001d015006_P004	Maize	plasma membrane	87.17	86.17
KXG37644	Sorghum	plasma membrane	87.76	85.27
HORVU3Hr1G108010.6	Barley	plasma membrane	84.55	83.81
GSMUA_Achr5P08750_001	Banana	plasma membrane	83.38	82.9
CDX88296	Canola	plasma membrane	70.55	81.76
PGSC0003DMT400024446	Potato	plasma membrane	79.01	80.65
KRH52673	Soybean	plasma membrane	80.17	80.65
CDY03017	Canola	plasma membrane	78.72	80.6
CDY60831	Canola	plasma membrane	78.72	80.36
KRH16232	Soybean	plasma membrane	79.88	80.35
VIT_06s0009g03520.t01	Wine grape	plasma membrane	79.88	80.35
Bra024788.1-P	Field mustard	plasma membrane	78.43	80.3
CDY45179	Canola	plasma membrane	78.43	80.3
CDY17419	Canola	plasma membrane	78.43	80.06
KRH62014	Soybean	endoplasmic reticulum	79.59	80.06
Solyc11g064790.1.1	Tomato	plasma membrane	79.01	79.94
AT2G03120.1	Thale cress	plasma membrane	79.88	79.65
PGSC0003DMT400058489	Potato	plasma membrane	78.13	79.29
Solyc01g008820.2.1	Tomato	plasma membrane	77.55	78.7
CDY64408	Canola	plasma membrane	78.43	78.43
CDY09342	Canola	plasma membrane	78.13	78.13
Bra026567.1-P	Field mustard	plasma membrane	78.13	78.13
Bra017402.1-P	Field mustard	golgi, plasma membrane	34.99	76.43
GSMUA_Achr1P24450_001	Banana	plasma membrane	65.89	74.34
CDY03016	Canola	extracellular, golgi, plasma membrane	25.95	67.94
Zm00001d015005_P002	Maize	plasma membrane	44.31	63.87
Zm00001d054017_P003	Maize	plasma membrane	87.76	55.43
OQU87114	Sorghum	plasma membrane	45.19	43.06
Os10t0393100-01	Rice	plasma membrane	31.49	29.11
Os11t0433200-02	Rice	cytosol, plasma membrane	25.95	19.56
Os06t0730900-01	Rice	plasma membrane	26.24	16.61
Os02t0823000-01	Rice	plasma membrane	24.2	15.23
Os01t0914700-01	Rice	plasma membrane	22.16	14.53
Os02t0823100-01	Rice	plasma membrane	4.08	4.86

Protein Annotations

MapMan:18.10.1.4	EntrezGene:4328088	MEROPS:A22.A15	EMBL:AK061815	EMBL:AK102022	ProteinID:BAD07725.1
ProteinID:BAF07600.1	ProteinID:BAS76666.1	ProteinID:BAS94202.1	ncoils:Coil	ProteinID:EEE56177.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005764	GO:GO:0005765	GO:GO:0005773	GO:GO:0005783	GO:GO:0005789	GO:GO:0005794
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019538	GO:GO:0030660	GO:GO:0071458	GO:GO:0071556	EnsemblPlantsGene:Os02g0117400
EnsemblPlants:Os02t0117400-01	PFAM:PF04258	PANTHER:PTHR12174	PANTHER:PTHR12174:SF23	InterPro:Peptidase_A22B_SPP	InterPro:Preselin/SPP
UniProt:Q6ZGL9	SMART:SM00730	TMHMM:TMhelix	UniParc:UPI00002367BB	RefSeq:XP_015627635.1	SEG:seg

Description

SPP1Peptidase A22B, signal peptide peptidase domain containing protein. (Os02t0117400-01)

Coordinates

chr2:+:906668..911368

Molecular Weight (calculated)

37923.8 Da

IEP (calculated)

7.761

GRAVY (calculated)

0.560

Length

343 amino acids

Sequence
(BLAST)

001: MKTHERAANL ALAGLSLAPL VVKVEPNVNV ILTACLAVYV GCYRSVKPTP PSETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFILGIA
101: ALCATLLPSI KRFLPKEWND NAIVWCAPFF HSLSVEFTKS QVVASIPGFF FCIWYAAKKH WLANNVLGIS FCIQGIEMLS LGSFKTGAIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDAAR PFSMLGLGDI VIPGIFVALA LRFDVSRGIK NRYFNSAFLG YTVGLTVTII VMNWFQAAQP ALLYIVPGVI
301: GFVAVHCLWN GEVKPLLEYN ESKAEEEDAV EEDTDSKQNK KEE

Best Arabidopsis Sequence Match ( AT2G03120.1 )
(BLAST)

001: MKNCERFANL ALAGLTLAPL VVRVNPNLNV ILTACITVYV GCFRSVKDTP PTETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIV
101: ALSATLLPAI RRFLPNPWND NLIVWRFPYF KSLEVEFTKS QVVAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRRQ PQYFTSAFIG YAVGVILTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLLAFD ESKTEEATTD ESKTSEEVNK AHDE

Arabidopsis Description

SPPSignal peptide peptidase [Source:UniProtKB/Swiss-Prot;Acc:O81062]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.