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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G340600.1
TraesCS1D01G342600.1
TraesCS2A01G368500.1
TraesCS2B01G385700.2
TraesCS2D01G365300.2
TraesCS3A01G274800.1
TraesCS3A01G313000.1
TraesCS3B01G158900.1
TraesCS3B01G308400.1
TraesCS3D01G141300.1
TraesCS3D01G274500.1
TraesCS6A01G237600.1
TraesCS6B01G266100.1
TraesCS6D01G220300.1
TraesCS7A01G300700.1
TraesCS7D01G296400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G03120.1 TraesCS1A01G340600.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS1D01G342600.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS3A01G274800.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS3A01G313000.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS3B01G158900.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS3B01G308400.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS3D01G141300.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS3D01G274500.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS2A01G368500.1 AT3G60600.1 21798944
AT2G03120.1 TraesCS2B01G385700.2 AT3G60600.1 21798944
AT2G03120.1 TraesCS2D01G365300.2 AT3G60600.1 21798944
AT2G03120.1 TraesCS6A01G237600.1 AT3G60600.1 21798944
AT2G03120.1 TraesCS6B01G266100.1 AT3G60600.1 21798944
AT2G03120.1 TraesCS6D01G220300.1 AT3G60600.1 21798944
AT2G03120.1 TraesCS7A01G300700.1 AT3G60600.1 21798944
AT2G03120.1 TraesCS7D01G296400.1 AT3G60600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G048100.2 Wheat plasma membrane 96.49 96.49
HORVU6Hr1G009670.1 Barley plasma membrane 95.91 95.91
TraesCS6B01G064500.2 Wheat plasma membrane 95.61 95.89
TraesCS6B01G064600.2 Wheat plasma membrane 95.32 95.6
Os02t0117400-01 Rice plasma membrane 87.43 87.17
Os05t0436400-03 Rice plasma membrane 72.22 86.36
EES04366 Sorghum golgi, plasma membrane 85.67 85.17
Zm00001d015006_P004 Maize plasma membrane 84.21 83.0
KXG37644 Sorghum plasma membrane 83.92 81.3
CDX88296 Canola plasma membrane 69.59 80.41
PGSC0003DMT400024446 Potato plasma membrane 78.95 80.36
GSMUA_Achr5P08750_001 Banana plasma membrane 80.7 80.0
Solyc11g064790.1.1 Tomato plasma membrane 78.36 79.06
PGSC0003DMT400058489 Potato plasma membrane 78.07 78.99
Solyc01g008820.2.1 Tomato plasma membrane 77.78 78.7
KRH52673 Soybean plasma membrane 78.36 78.59
VIT_06s0009g03520.t01 Wine grape plasma membrane 78.07 78.3
KRH62014 Soybean endoplasmic reticulum 78.07 78.3
KRH16232 Soybean plasma membrane 77.78 78.01
CDY03017 Canola plasma membrane 76.32 77.91
CDY60831 Canola plasma membrane 76.32 77.68
Bra024788.1-P Field mustard plasma membrane 76.02 77.61
CDY45179 Canola plasma membrane 76.02 77.61
CDY17419 Canola plasma membrane 76.02 77.38
AT2G03120.1 Thale cress plasma membrane 77.78 77.33
Bra026567.1-P Field mustard plasma membrane 76.32 76.09
CDY09342 Canola plasma membrane 76.32 76.09
CDY64408 Canola plasma membrane 76.02 75.8
Bra017402.1-P Field mustard golgi, plasma membrane 34.5 75.16
GSMUA_Achr1P24450_001 Banana plasma membrane 63.16 71.05
CDY03016 Canola extracellular, golgi, plasma membrane 24.27 63.36
Zm00001d015005_P002 Maize plasma membrane 43.27 62.18
Zm00001d054017_P003 Maize plasma membrane 85.96 54.14
OQU87114 Sorghum plasma membrane 42.69 40.56
Protein Annotations
EnsemblPlants:TraesCSU01G107100.2EnsemblPlantsGene:TraesCSU01G107100GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0016787InterPro:Peptidase_A22B_SPPInterPro:Preselin/SPPPANTHER:PTHR12174
PANTHER:PTHR12174:SF23PFAM:PF04258PFscan:PS51257SEG:segSMART:SM00730TMHMM:TMhelix
MapMan:18.10.1.4:::::
Description
No Description!
Coordinates
chrUn:+:93797403..93801761
Molecular Weight (calculated)
37756.5 Da
IEP (calculated)
8.561
GRAVY (calculated)
0.546
Length
342 amino acids
Sequence
(BLAST)
001: MRTHERAANL ALAGLSLAPL VINVNPNLNV ILTACLTVYV GCYRSVKATP PSETMSKEHA MRYPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIA
101: ALCATLLPSV KRFLPEGWND NAIIWRAPYF HSLSVEFTKS QVVASIPGFF FCVWYAMKKH WLANNVLGVA FCIQGIEMLS LGSFKTGGIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTADAAR PFSMLGLGDI VIPGIFVALA LRFDISRGIK SRHYFNSAFL GYTVGLTVTI AVMNWFRAAQ PALLYIVPGV
301: IGFVAVHCLW NGEVKQLLEF TEAQDEEKEE GGDPNHESKK AN
Best Arabidopsis Sequence Match ( AT2G03120.1 )
(BLAST)
001: MKNCERFANL ALAGLTLAPL VVRVNPNLNV ILTACITVYV GCFRSVKDTP PTETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIV
101: ALSATLLPAI RRFLPNPWND NLIVWRFPYF KSLEVEFTKS QVVAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRRQ PQYFTSAFIG YAVGVILTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLLAFD ESKTEEATTD ESKTSEEVNK AHDE
Arabidopsis Description
SPPSignal peptide peptidase [Source:UniProtKB/Swiss-Prot;Acc:O81062]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.