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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G340600.1
TraesCS1D01G342600.1
TraesCS2A01G368500.1
TraesCS2B01G385700.2
TraesCS2D01G365300.2
TraesCS3A01G274800.1
TraesCS3A01G313000.1
TraesCS3B01G158900.1
TraesCS3B01G308400.1
TraesCS3D01G141300.1
TraesCS3D01G274500.1
TraesCS6A01G237600.1
TraesCS6B01G266100.1
TraesCS6D01G220300.1
TraesCS7A01G300700.1
TraesCS7D01G296400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G03120.1 TraesCS1A01G340600.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS1D01G342600.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS3A01G274800.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS3A01G313000.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS3B01G158900.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS3B01G308400.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS3D01G141300.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS3D01G274500.1 AT3G16310.1 21798944
AT2G03120.1 TraesCS2A01G368500.1 AT3G60600.1 21798944
AT2G03120.1 TraesCS2B01G385700.2 AT3G60600.1 21798944
AT2G03120.1 TraesCS2D01G365300.2 AT3G60600.1 21798944
AT2G03120.1 TraesCS6A01G237600.1 AT3G60600.1 21798944
AT2G03120.1 TraesCS6B01G266100.1 AT3G60600.1 21798944
AT2G03120.1 TraesCS6D01G220300.1 AT3G60600.1 21798944
AT2G03120.1 TraesCS7A01G300700.1 AT3G60600.1 21798944
AT2G03120.1 TraesCS7D01G296400.1 AT3G60600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCSU01G107100.2 Wheat plasma membrane 96.49 96.49
TraesCS6B01G064600.2 Wheat plasma membrane 95.91 96.19
TraesCS6B01G064500.2 Wheat plasma membrane 95.61 95.89
HORVU6Hr1G009670.1 Barley plasma membrane 95.61 95.61
Os02t0117400-01 Rice plasma membrane 87.13 86.88
Os05t0436400-03 Rice plasma membrane 71.93 86.01
EES04366 Sorghum golgi, plasma membrane 84.8 84.3
Zm00001d015006_P004 Maize plasma membrane 83.04 81.84
GSMUA_Achr5P08750_001 Banana plasma membrane 80.99 80.29
KXG37644 Sorghum plasma membrane 82.75 80.17
PGSC0003DMT400024446 Potato plasma membrane 78.07 79.46
CDX88296 Canola plasma membrane 68.71 79.39
VIT_06s0009g03520.t01 Wine grape plasma membrane 78.36 78.59
Solyc11g064790.1.1 Tomato plasma membrane 77.49 78.17
PGSC0003DMT400058489 Potato plasma membrane 77.19 78.11
KRH52673 Soybean plasma membrane 77.78 78.01
CDY03017 Canola plasma membrane 76.32 77.91
Solyc01g008820.2.1 Tomato plasma membrane 76.9 77.81
KRH62014 Soybean endoplasmic reticulum 77.49 77.71
CDY45179 Canola plasma membrane 76.02 77.61
Bra024788.1-P Field mustard plasma membrane 76.02 77.61
CDY60831 Canola plasma membrane 75.73 77.08
KRH16232 Soybean plasma membrane 76.61 76.83
CDY17419 Canola plasma membrane 75.44 76.79
AT2G03120.1 Thale cress plasma membrane 77.19 76.74
Bra026567.1-P Field mustard plasma membrane 76.32 76.09
CDY09342 Canola plasma membrane 76.32 76.09
CDY64408 Canola plasma membrane 76.02 75.8
Bra017402.1-P Field mustard golgi, plasma membrane 34.21 74.52
GSMUA_Achr1P24450_001 Banana plasma membrane 62.28 70.07
CDY03016 Canola extracellular, golgi, plasma membrane 25.15 65.65
Zm00001d015005_P002 Maize plasma membrane 42.69 61.34
Zm00001d054017_P003 Maize plasma membrane 85.38 53.78
OQU87114 Sorghum plasma membrane 41.81 39.72
TraesCS7A01G280600.1 Wheat plasma membrane 28.95 26.61
TraesCS4A01G495400.1 Wheat peroxisome, plasma membrane, vacuole 20.18 20.0
TraesCS7A01G568900.1 Wheat plasma membrane 25.73 15.58
TraesCS6A01G406000.1 Wheat plasma membrane 24.56 15.38
TraesCS7A01G003000.1 Wheat plasma membrane 23.98 15.33
TraesCS4A01G495600.2 Wheat plasma membrane 23.68 15.03
TraesCS3A01G420400.2 Wheat plasma membrane 22.51 13.95
TraesCS7A01G003200.1 Wheat plasma membrane 19.01 13.46
Protein Annotations
EnsemblPlants:TraesCS6A01G048100.2EnsemblPlantsGene:TraesCS6A01G048100GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0016787InterPro:Peptidase_A22B_SPPInterPro:Preselin/SPPPANTHER:PTHR12174
PANTHER:PTHR12174:SF23PFAM:PF04258PFscan:PS51257SEG:segSMART:SM00730TMHMM:TMhelix
MapMan:18.10.1.4:::::
Description
No Description!
Coordinates
chr6A:+:24326931..24331885
Molecular Weight (calculated)
37598.4 Da
IEP (calculated)
8.559
GRAVY (calculated)
0.578
Length
342 amino acids
Sequence
(BLAST)
001: MRTHERAANL ALAGLSLAPL VINVNPNLNV ILTACLTVYV GCYRSVKATP PSETMSKEHA MRYPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIA
101: ALCATLLPSV KRVLPEGWND NAIIWRAPYF HSLSVEFTKS QVVASIPGFF FCVWYVMKKH WLANNVLGVA FCIQGIEMLS LGSFKTGGIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTADTAR PFSMLGLGDI VIPGIFVALA LRFDISRGIK SRGYFNSAFL GYTAGLTVTI VVMNWFRAAQ PALLYIVPGV
301: IGFVAVHCLW NGEVKPLLEF SEAQAEEKEE GGDPDHQSKK AD
Best Arabidopsis Sequence Match ( AT2G03120.1 )
(BLAST)
001: MKNCERFANL ALAGLTLAPL VVRVNPNLNV ILTACITVYV GCFRSVKDTP PTETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIV
101: ALSATLLPAI RRFLPNPWND NLIVWRFPYF KSLEVEFTKS QVVAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRRQ PQYFTSAFIG YAVGVILTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLLAFD ESKTEEATTD ESKTSEEVNK AHDE
Arabidopsis Description
SPPSignal peptide peptidase [Source:UniProtKB/Swiss-Prot;Acc:O81062]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.