CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plasma membrane

Predictor Summary:

extracellular 5
golgi 6
plasma membrane 7
endoplasmic reticulum 6
vacuole 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EES02290
EES12559
EES14570
EES19830
KXG31128

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G03120.1	EES02290	AT3G16310.1	21798944
AT2G03120.1	EES19830	AT3G16310.1	21798944
AT2G03120.1	EES12559	AT3G60600.1	21798944
AT2G03120.1	EES14570	AT3G60600.1	21798944
AT2G03120.1	KXG31128	AT3G60600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015006_P004	Maize	plasma membrane	95.64	94.81
KXG37644	Sorghum	plasma membrane	96.22	93.77
Os02t0117400-01	Rice	plasma membrane	88.95	89.21
Os05t0436400-03	Rice	plasma membrane	73.55	88.46
TraesCS3D01G492200.1	Wheat	plasma membrane	86.34	86.34
TraesCS3B01G545500.1	Wheat	plasma membrane	86.05	86.05
TraesCS6B01G064500.2	Wheat	plasma membrane	85.17	85.92
TraesCSU01G107100.2	Wheat	plasma membrane	85.17	85.67
TraesCS6B01G064600.2	Wheat	plasma membrane	84.88	85.63
TraesCS6A01G048100.2	Wheat	plasma membrane	84.3	84.8
HORVU6Hr1G009670.1	Barley	plasma membrane	84.01	84.5
GSMUA_Achr5P08750_001	Banana	plasma membrane	83.14	82.9
CDX88296	Canola	plasma membrane	71.22	82.77
HORVU3Hr1G108010.6	Barley	plasma membrane	82.27	81.79
PGSC0003DMT400058489	Potato	plasma membrane	79.36	80.77
PGSC0003DMT400024446	Potato	plasma membrane	78.78	80.65
KRH16232	Soybean	plasma membrane	79.65	80.35
Solyc01g008820.2.1	Tomato	plasma membrane	78.78	80.18
KRH52673	Soybean	plasma membrane	79.36	80.06
KRH62014	Soybean	endoplasmic reticulum	79.36	80.06
Solyc11g064790.1.1	Tomato	plasma membrane	78.78	79.94
VIT_06s0009g03520.t01	Wine grape	plasma membrane	79.07	79.77
CDY03017	Canola	plasma membrane	77.62	79.7
CDY60831	Canola	plasma membrane	77.62	79.46
Bra024788.1-P	Field mustard	plasma membrane	77.33	79.4
CDY45179	Canola	plasma membrane	77.33	79.4
CDY17419	Canola	plasma membrane	77.33	79.17
AT2G03120.1	Thale cress	plasma membrane	78.49	78.49
Bra026567.1-P	Field mustard	plasma membrane	77.62	77.84
CDY64408	Canola	plasma membrane	77.62	77.84
CDY09342	Canola	plasma membrane	77.62	77.84
Bra017402.1-P	Field mustard	golgi, plasma membrane	34.88	76.43
GSMUA_Achr1P24450_001	Banana	plasma membrane	65.12	73.68
Zm00001d015005_P002	Maize	plasma membrane	47.09	68.07
CDY03016	Canola	extracellular, golgi, plasma membrane	25.0	65.65
Zm00001d054017_P003	Maize	plasma membrane	95.64	60.59
OQU87114	Sorghum	plasma membrane	44.77	42.78
KXG25380	Sorghum	plasma membrane	30.52	28.3
OQU81829	Sorghum	plasma membrane	25.29	16.29
EER90450	Sorghum	plasma membrane	25.29	16.23
OQU88099	Sorghum	plasma membrane	21.8	14.48
EES06047	Sorghum	plasma membrane	22.97	14.44

Protein Annotations

MapMan:18.10.1.4	EntrezGene:8085206	UniProt:C5XSC1	EnsemblPlants:EES04366	ProteinID:EES04366	ProteinID:EES04366.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005764	GO:GO:0005765	GO:GO:0005773	GO:GO:0005783	GO:GO:0005794
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019538	GO:GO:0030660	GO:GO:0071458	GO:GO:0071556	PFAM:PF04258	PFscan:PS51257
PANTHER:PTHR12174	PANTHER:PTHR12174:SF23	InterPro:Peptidase_A22B_SPP	InterPro:Preselin/SPP	SMART:SM00730	EnsemblPlantsGene:SORBI_3004G013100
unigene:Sbi.18575	TMHMM:TMhelix	UniParc:UPI0001A85218	RefSeq:XP_002451390.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:+:1073476..1078488

Molecular Weight (calculated)

37849.7 Da

IEP (calculated)

8.197

GRAVY (calculated)

0.585

Length

344 amino acids

Sequence
(BLAST)

001: MRTHERAANL ALAGLSLAPL VVNVNPNVNV VLTACLTVYV GCYRSVKPTP PSETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFILGIV
101: ALSATLLPSI KHFLPKEWND NLIVWRAPFF HSLSVEFTKS QIVASIPGFF FCLWYASKKH WLANNVLGLA FCIQGIEMLS LGSFKTGAIL LGGLFVYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTADAAR PFSMLGLGDI VIPGIFVALA LRFDVSRGIK NRYFNSAFLG YAVGMTVTII VMNWFQAAQP ALLYLVPGVV
301: GFVAVPCLWY GEVKQLLEFD ESKAEAEEGS AEDDDSSKGN KKVD

Best Arabidopsis Sequence Match ( AT2G03120.1 )
(BLAST)

001: MKNCERFANL ALAGLTLAPL VVRVNPNLNV ILTACITVYV GCFRSVKDTP PTETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIV
101: ALSATLLPAI RRFLPNPWND NLIVWRFPYF KSLEVEFTKS QVVAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRRQ PQYFTSAFIG YAVGVILTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLLAFD ESKTEEATTD ESKTSEEVNK AHDE

Arabidopsis Description

SPPSignal peptide peptidase [Source:UniProtKB/Swiss-Prot;Acc:O81062]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.