CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042378_P001	Maize	plasma membrane	90.35	91.05
Os01t0914700-01	Rice	plasma membrane	77.22	76.48
TraesCS3A01G420400.2	Wheat	plasma membrane	65.44	61.41
TraesCS3D01G416200.1	Wheat	plastid	65.44	60.11
HORVU3Hr1G093180.1	Barley	golgi, plasma membrane	63.51	59.82
TraesCS3B01G455800.1	Wheat	plasma membrane, plastid	64.67	59.4
OQU81829	Sorghum	plasma membrane	46.91	45.51
EER90450	Sorghum	plasma membrane	40.73	39.37
EES06047	Sorghum	plasma membrane	39.96	37.84
KXG25380	Sorghum	plasma membrane	16.6	23.18
EES04366	Sorghum	golgi, plasma membrane	14.48	21.8
KXG37644	Sorghum	plasma membrane	14.67	21.53
OQU87114	Sorghum	plasma membrane	8.49	12.22

Protein Annotations

MapMan:18.10.1.4	Gene3D:3.50.30.30	UniProt:A0A1W0W128	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019538	EnsemblPlants:OQU88099	ProteinID:OQU88099	ProteinID:OQU88099.1	InterPro:PA_domain
PFAM:PF02225	PFAM:PF04258	PANTHER:PTHR12174	PANTHER:PTHR12174:SF44	InterPro:Peptidase_A22B_SPP	InterPro:Preselin/SPP
SMART:SM00730	EnsemblPlantsGene:SORBI_3003G400000	SUPFAM:SSF52025	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0003C6F174
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:70869979..70873116

Molecular Weight (calculated)

55574.5 Da

IEP (calculated)

6.056

GRAVY (calculated)

0.524

Length

518 amino acids

Sequence
(BLAST)

001: MALPTIPPRA LLLLLLLSVL LLAHPAAGAG TGSEFDDGTS PKFPGCDNTL QKVKVTYWVD GDERSSLTGI SARFGVVLPD AASDDQKQRA VVPSPKNGCA
101: KSSTQLTGSV AVAVRGECTF IEKAKAAEAA GAVAILLVND EDDLQRMVCS DKDPPPNIGI PVVMVSKSAG DKVQSAIGNG AKVDILMYAP LKPSFDGAIP
201: FLWMMAVGTV ACASVWTVAV VGEEPTKPGD VSLGGEENPD AEVVELQTQT ALVFIVTSSL VLLFLFFFNS VWSAWLLVSL FCLGAVHGME FVASSLIVRL
301: CQRCREAKAK LPAIGNVKVV TLVMLPLAFI FALAWVTHQN SPLAWVGQNL MGICMMILVL QVVHMPNIKV ATALLVAAFF YDIFWVFISP LFFKKSVMIT
401: VARGTDDGPS LPMVLKMPKE FDSWNGYDMI GFGDILFPGL LVAFSFRFDR THGKDLTDGY FLCLMIGYAF GLSCTYVGLY LMKSGQPALL YLVPSTLGVI
501: VLLGAKRGEL GQLWNAKA

Best Arabidopsis Sequence Match ( AT1G05820.1 )
(BLAST)

001: MSLPPFTCRL LAAAAALYLI GLLCVGADTK DVTAPKIPGC SNEFQMVKVE NWVNGENGET FTAMTAQFGT MLPSDKDKAV KLPVALTTPL DSCSNLTSKL
101: SWSIALSVRG ECAFTVKAQV AQAGGAAALV LINDKEELDE MVCGEKDTSL NVSIPILMIT TSSGDALKKS IMQNKKVELL LYAPKSPIVD YAVVFLWLMS
201: VGTVFVASVW SHVTSPKKND EQYDELSPKK SSNVDATKGG AEEETLDISA MGAVIFVISA STFLVLLFFF MSSWFILILT IFFVIGGMQG MHNINVTLIT
301: RRCSKCGQKN LKLPLLGNTS ILSLVVLLFC FVVAILWFMN RKTSHAWAGQ DIFGICMMIN VLQVARLPNI RVATILLCCA FFYDIFWVFI SPLIFKQSVM
401: IAVARGSKDT GESIPMLLRI PRLSDPWGGY NMIGFGDILF PGLLICFIFR FDKENNKGVS NGYFPWLMFG YGLGLFLTYL GLYVMNGHGQ PALLYLVPCT
501: LGITVILGLV RKELRDLWNY GTQQPSAADV NPSPEA

Arabidopsis Description

SPPL5Signal peptide peptidase-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9MA44]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.