CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051873_P002	Maize	plasma membrane	87.93	87.77
Os02t0823000-01	Rice	plasma membrane	82.63	82.94
TraesCS6D01G389600.1	Wheat	plasma membrane	80.99	81.14
TraesCS6A01G406000.1	Wheat	plasma membrane	80.8	80.95
TraesCS6B01G451100.1	Wheat	plasma membrane	80.62	80.77
EER90450	Sorghum	plasma membrane	77.15	78.73
GSMUA_Achr4P12000_001	Banana	plasma membrane	74.22	76.46
GSMUA_Achr10P...	Banana	plasma membrane	73.67	75.75
KRH77554	Soybean	extracellular, golgi	22.67	72.94
VIT_15s0046g02460.t01	Wine grape	plasma membrane	69.29	70.97
VIT_02s0012g02640.t01	Wine grape	golgi, plasma membrane, plastid	19.2	70.0
VIT_02s0025g03400.t01	Wine grape	plasma membrane	70.02	69.89
KRH48125	Soybean	plasma membrane	69.1	69.87
Bra033245.1-P	Field mustard	plasma membrane	62.89	69.64
KRH00766	Soybean	plasma membrane	68.37	69.39
KRH40447	Soybean	plasma membrane	68.19	69.2
KRH65010	Soybean	plasma membrane	68.56	69.19
AT1G63690.1	Thale cress	plasma membrane	68.01	68.89
Solyc08g081180.2.1	Tomato	plasma membrane	68.19	68.57
PGSC0003DMT400032136	Potato	plasma membrane	68.19	68.57
Bra027793.1-P	Field mustard	plasma membrane	67.28	68.27
CDY45351	Canola	plasma membrane	67.28	68.27
CDY08318	Canola	plasma membrane	66.91	67.9
CDY15163	Canola	plasma membrane	65.81	66.67
CDX90049	Canola	plasma membrane	65.63	66.48
CDY38021	Canola	plasma membrane	65.63	66.48
Bra032646.1-P	Field mustard	plasma membrane	65.27	66.23
KRH27921	Soybean	plasma membrane	65.27	65.75
Solyc01g094680.2.1	Tomato	plasma membrane	64.72	65.68
AT1G01650.1	Thale cress	plasma membrane	64.35	65.19
Solyc10g012430.2.1	Tomato	plasma membrane	63.25	63.84
TraesCS4D01G010500.1	Wheat	plasma membrane	54.3	63.46
KRH77552	Soybean	plasma membrane	42.23	61.93
KRH54524	Soybean	plasma membrane	25.59	55.34
KRH66530	Soybean	golgi, plasma membrane, plastid	18.46	51.53
OQU81829	Sorghum	plasma membrane	47.35	48.5
OQU88099	Sorghum	plasma membrane	37.84	39.96
KXG25380	Sorghum	plasma membrane	16.64	24.53
EES04366	Sorghum	golgi, plasma membrane	14.44	22.97
KXG37644	Sorghum	plasma membrane	14.44	22.38
KRH61017	Soybean	cytosol	31.08	21.82
OQU87114	Sorghum	plasma membrane	8.23	12.5

Protein Annotations

MapMan:18.10.1.4	Gene3D:3.50.30.30	EntrezGene:8059707	UniProt:C5XW22	EnsemblPlants:EES06047	ProteinID:EES06047
ProteinID:EES06047.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005764	GO:GO:0005765	GO:GO:0005773	GO:GO:0005783
GO:GO:0005794	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019538	GO:GO:0030660	GO:GO:0071458	GO:GO:0071556	InterPro:PA_domain
PFAM:PF02225	PFAM:PF04258	PANTHER:PTHR12174	PANTHER:PTHR12174:SF61	InterPro:Peptidase_A22B_SPP	InterPro:Preselin/SPP
SMART:SM00730	EnsemblPlantsGene:SORBI_3004G351100	SUPFAM:SSF52025	unigene:Sbi.15685	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0001A85CB0	RefSeq:XP_002453071.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:67969287..67979690

Molecular Weight (calculated)

59934.6 Da

IEP (calculated)

6.505

GRAVY (calculated)

0.405

Length

547 amino acids

Sequence
(BLAST)

001: MARRALEPAA VLLVLAALAA VAAGGDIRHQ DDDAPKIPGC SNDFVLVKVR TWINQKDKIE FVGVGARFGP KIESKEKQSN WTNLLLPDTS DCCTPPKEKV
101: AGDILLVERG NCTFTTKARV AESAGASAII IINDKQELYK MVCETNETNL DIGIPAVLLP KDAGSSLERS LSSGEVLVEL YSPDRPLVDT AEVFLWLMAV
201: GTILCASYWS AWSAREADIE QEKLLKDGHE VPPNFEAGGS SGMVEINMVS AILFVVIASC FLITLYKKMS HWFVELLVVI FCIGGVEGLQ TCLVGLLSMS
301: RWFKPAAGSF VKVPFFGAVS YLTLAVCPFC IVFAVLWGVY RRLSFAWIGQ DILGITLIVT VIQIVRIPNL KVGSALLSCA FLYDIFWVFI SKMIFHESVM
401: IVVARGDKTD EDGVPMLLKI PRMFDPWGGY SIIGFGDILL PGLLVAFALR YDWAAKKTLQ SGYFLWSMVA YGSGLLITYV ALNLMDGHGQ PALLYIVPFT
501: IGTFLALGMK RGELRNLWTK GQPERVCTHM HTHPSPKDSP VAVSSTS

Best Arabidopsis Sequence Match ( AT1G63690.1 )
(BLAST)

001: MDSLRFLRIL LLSSSILLLS LRSTVTAGDI VHQDNLAPKK PGCENDFVLV KVQTWIDGVE NEEFVGVGAR FGKRIVSKEK NANQTHLVFA NPRDSCTPLK
101: NKLSGDVVIV ERGNCRFTAK ANNAEAAGAS ALLIINNQKE LYKMVCEPDE TDLDIQIPAV MLPQDAGASL QKMLANSSKV SAQLYSPRRP AVDVAEVFLW
201: LMAIGTILCA SYWSAWSARE AAIEHDKLLK DAIDEIPNTN DGGSGVVEIN SISAIFFVVL ASGFLVILYK LMSYWFVELL VVVFCIGGVE GLQTCLVALL
301: SRWFQRAADT YVKVPFLGPI SYLTLAVSPF CIVFAVLWAV YRVHSFAWIG QDVLGIALII TVLQIVHVPN LKVGTVLLSC AFLYDIFWVF VSKKLFHESV
401: MIVVARGDKS GEDGIPMLLK IPRMFDPWGG YSIIGFGDIL LPGLLIAFAL RYDWLANKTL RTGYFIWAMV AYGLGLLITY VALNLMDGHG QPALLYIVPF
501: TLGTMLTLAR KRDDLWILWT KGEPERACPH HVRLEQCSEK

Arabidopsis Description

SPPL2Signal peptide peptidase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W469]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.