Factsheet for VIT_02s0025g03400.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	golgi, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77554	Soybean	extracellular, golgi	25.55	82.35
GSMUA_Achr4P12000_001	Banana	plasma membrane	78.65	81.17
Bra027793.1-P	Field mustard	plasma membrane	79.01	80.33
CDY45351	Canola	plasma membrane	79.01	80.33
VIT_15s0046g02460.t01	Wine grape	plasma membrane	77.74	79.78
Solyc08g081180.2.1	Tomato	plasma membrane	79.01	79.6
CDY08318	Canola	plasma membrane	78.28	79.59
AT1G63690.1	Thale cress	plasma membrane	78.28	79.44
PGSC0003DMT400032136	Potato	plasma membrane	78.65	79.23
KRH27921	Soybean	plasma membrane	77.01	77.72
VIT_02s0012g02640.t01	Wine grape	golgi, plasma membrane, plastid	21.17	77.33
GSMUA_Achr10P...	Banana	plasma membrane	75.0	77.26
KRH77552	Soybean	plasma membrane	50.91	74.8
Os02t0823000-01	Rice	plasma membrane	71.72	72.11
EER90450	Sorghum	plasma membrane	70.26	71.83
Zm00001d014901_P001	Maize	plasma membrane	70.07	71.64
EES06047	Sorghum	plasma membrane	69.89	70.02
Os06t0730900-01	Rice	plasma membrane	69.16	69.93
TraesCS6A01G406000.1	Wheat	plasma membrane	68.98	69.23
TraesCS6B01G451100.1	Wheat	plasma membrane	68.8	69.05
TraesCS6D01G389600.1	Wheat	plasma membrane	68.61	68.86
KRH54524	Soybean	plasma membrane	31.39	67.98
Zm00001d051873_P002	Maize	plasma membrane	66.79	66.79
TraesCS7D01G543700.1	Wheat	plasma membrane	66.61	66.48
TraesCS7A01G568900.1	Wheat	plasma membrane	66.97	64.96
TraesCS7B01G489700.3	Wheat	plasma membrane, vacuole	66.97	64.16
HORVU7Hr1G122650.3	Barley	nucleus, plasma membrane	67.15	60.23
KRH66530	Soybean	golgi, plasma membrane, plastid	20.8	58.16
TraesCS4D01G010500.1	Wheat	plasma membrane	47.81	55.98
VIT_05s0062g01250.t01	Wine grape	plasma membrane	46.53	47.84
VIT_03s0097g00390.t01	Wine grape	mitochondrion	10.4	25.91
KRH61017	Soybean	cytosol	34.67	24.39
VIT_06s0009g03520.t01	Wine grape	plasma membrane	14.96	24.05
VIT_16s0050g00580.t01	Wine grape	endoplasmic reticulum, plasma membrane	15.69	23.18

Protein Annotations

EntrezGene:100241031	wikigene:100241031	MapMan:18.10.1.4	Gene3D:3.50.30.30	MEROPS:A22.A03	MEROPS:A22.A05
ProteinID:CBI34660	ProteinID:CBI34660.3	UniProt:D7TVY5	EMBL:FN596251	GO:GO:0003674	GO:GO:0003824
GO:GO:0004190	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005764
GO:GO:0005765	GO:GO:0005773	GO:GO:0005783	GO:GO:0005794	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	GO:GO:0030660
GO:GO:0071458	GO:GO:0071556	EntrezGene:LOC100241031	wikigene:LOC100241031	InterPro:PA_domain	PFAM:PF02225
PFAM:PF04258	PANTHER:PTHR12174	PANTHER:PTHR12174:SF47	InterPro:Peptidase_A22B_SPP	InterPro:Preselin/SPP	SMART:SM00730
SUPFAM:SSF52025	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00015CC4E9	ArrayExpress:VIT_02s0025g03400	EnsemblPlantsGene:VIT_02s0025g03400
EnsemblPlants:VIT_02s0025g03400.t01	unigene:Vvi.12424	RefSeq:XP_002274996	RefSeq:XP_002274996.2	SEG:seg	:

Description

No Description!

Coordinates

chr2:-:2898182..2908111

Molecular Weight (calculated)

60708.4 Da

IEP (calculated)

6.188

GRAVY (calculated)

0.390

Length

548 amino acids

Sequence
(BLAST)

001: MDLQRLCCVI LAFAVVLFVC FSSSVTAGDI VHDDDDAPKK PGCENDFVLV KVQTWVDGVE DAEFVGVGAR FGPKIVSKEK NAHQSHLTLS DPPDCCTAPR
101: KQLARDVIMV HRGNCRFTTK ANVAEAAGAS AVLIINNQKE LYKMVCEPDE TDLDIKIPAV MLPQEAGASL EKMLRNSSSV SVQLYSPRRP LVDIAEVFLW
201: LMAVGTILCA SYWSAWSARE AAIEQDKLLK DASDELTNAK DGGASGVVDI NTTSAVLFVV IASCFLVMLY KLMSYWFVEL LVVLFCIGGV EGLQTCLVAL
301: LSRWFKRAGE AFIKVPFFGA VSYLTLAVSP FCITFAVVWA VYRDVSFAWI GQDILGIALI ITVLQIVHIP NLKVGTVLLS CAFLYDIFWV FVSKKLFHES
401: VMIVVARGDR SGQDGIPMLL KIPRMFDPWG GYSIIGFGDI LLPGLLIAFS LRYDWLAKKN IQTGYFLWAM FAYGLGLLIT YVALNLMDGH GQPALLYIVP
501: FTLGTFLTLG RKRGDLKNLW TRGVPERPCP HVQHEHSQEF AQEFNEEK

Best Arabidopsis Sequence Match ( AT1G63690.1 )
(BLAST)

001: MDSLRFLRIL LLSSSILLLS LRSTVTAGDI VHQDNLAPKK PGCENDFVLV KVQTWIDGVE NEEFVGVGAR FGKRIVSKEK NANQTHLVFA NPRDSCTPLK
101: NKLSGDVVIV ERGNCRFTAK ANNAEAAGAS ALLIINNQKE LYKMVCEPDE TDLDIQIPAV MLPQDAGASL QKMLANSSKV SAQLYSPRRP AVDVAEVFLW
201: LMAIGTILCA SYWSAWSARE AAIEHDKLLK DAIDEIPNTN DGGSGVVEIN SISAIFFVVL ASGFLVILYK LMSYWFVELL VVVFCIGGVE GLQTCLVALL
301: SRWFQRAADT YVKVPFLGPI SYLTLAVSPF CIVFAVLWAV YRVHSFAWIG QDVLGIALII TVLQIVHVPN LKVGTVLLSC AFLYDIFWVF VSKKLFHESV
401: MIVVARGDKS GEDGIPMLLK IPRMFDPWGG YSIIGFGDIL LPGLLIAFAL RYDWLANKTL RTGYFIWAMV AYGLGLLITY VALNLMDGHG QPALLYIVPF
501: TLGTMLTLAR KRDDLWILWT KGEPERACPH HVRLEQCSEK

Arabidopsis Description

SPPL2Signal peptide peptidase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W469]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.