Factsheet for TraesCS4D01G010500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 4
golgi 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77554	Soybean	extracellular, golgi	25.43	70.0
TraesCS6B01G451100.1	Wheat	plasma membrane	72.01	61.72
TraesCS6D01G389600.1	Wheat	plasma membrane	71.79	61.54
Os02t0823000-01	Rice	plasma membrane	65.81	56.51
EES06047	Sorghum	plasma membrane	63.46	54.3
Zm00001d051873_P002	Maize	plasma membrane	62.61	53.47
GSMUA_Achr4P12000_001	Banana	plasma membrane	58.33	51.41
VIT_02s0012g02640.t01	Wine grape	golgi, plasma membrane, plastid	16.45	51.33
TraesCS7D01G543700.1	Wheat	plasma membrane	59.83	51.0
GSMUA_Achr10P...	Banana	plasma membrane	57.27	50.38
Bra033245.1-P	Field mustard	plasma membrane	52.78	50.0
VIT_15s0046g02460.t01	Wine grape	plasma membrane	55.34	48.5
KRH00766	Soybean	plasma membrane	55.34	48.05
KRH40447	Soybean	plasma membrane	55.34	48.05
VIT_02s0025g03400.t01	Wine grape	plasma membrane	55.98	47.81
KRH65010	Soybean	plasma membrane	55.34	47.79
AT1G63690.1	Thale cress	plasma membrane	55.13	47.78
KRH48125	Soybean	plasma membrane	54.91	47.5
PGSC0003DMT400032136	Potato	plasma membrane	55.13	47.43
Solyc08g081180.2.1	Tomato	plasma membrane	55.13	47.43
CDY45351	Canola	plasma membrane	54.27	47.12
Bra027793.1-P	Field mustard	plasma membrane	54.27	47.12
CDY08318	Canola	plasma membrane	54.06	46.94
CDX90049	Canola	plasma membrane	53.85	46.67
CDY15163	Canola	plasma membrane	53.63	46.48
CDY38021	Canola	plasma membrane	53.63	46.48
Bra032646.1-P	Field mustard	plasma membrane	53.42	46.38
KRH27921	Soybean	plasma membrane	53.42	46.04
AT1G01650.1	Thale cress	plasma membrane	52.99	45.93
Solyc01g094680.2.1	Tomato	plasma membrane	52.14	45.27
Solyc10g012430.2.1	Tomato	plasma membrane	50.64	43.73
TraesCS7D01G002900.1	Wheat	plasma membrane	30.34	41.64
KRH54524	Soybean	plasma membrane	22.22	41.11
KRH66530	Soybean	golgi, plasma membrane, plastid	15.17	36.22
TraesCS7D01G003100.1	Wheat	plasma membrane	40.17	35.14
KRH77552	Soybean	plasma membrane	27.14	34.05
TraesCS3D01G416200.1	Wheat	plastid	32.05	26.6
TraesCS7D01G279200.2	Wheat	plasma membrane	17.95	22.58
TraesCS3D01G492200.1	Wheat	plasma membrane	15.6	21.22
KRH61017	Soybean	cytosol	23.08	13.86

Protein Annotations

EnsemblPlants:TraesCS4D01G010500.1	EnsemblPlantsGene:TraesCS4D01G010500	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	InterPro:Peptidase_A22B_SPP	InterPro:Preselin/SPP	PANTHER:PTHR12174
PANTHER:PTHR12174:SF61	PFAM:PF04258	SEG:seg	SignalP:SignalP-noTM	SMART:SM00730	TMHMM:TMhelix
MapMan:18.10.1.4	:	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:4973669..4979351

Molecular Weight (calculated)

51270.3 Da

IEP (calculated)

10.028

GRAVY (calculated)

0.364

Length

468 amino acids

Sequence
(BLAST)

001: MGPTCHSLFR LIRVYLINYS VVVAGQGRPS ASSGGARLGM RTGVRRGRTS ARGAEGGERQ TRGALRRALA RRSSVSRSGC TARVSGRTAQ SLGGTTRLCT
101: ASQYTRSNIP YHHPTKKTDL DINIPAVLLP KDAGTILQGL FSLGKVSVQL YSPDRPLVDT AEDGHESSVN IDAEGSTGMV DITMTSAMLF IVVASLFLVM
201: LYKLMSHWFV ELLVVIFCIG GVEGLQTCLV ALLSRWFKPA AKSFVEVPFF GAVSYLTLAV CPFCIVFAVL WAVYRIALIV TVIQIVRIPN LKVESVLLGC
301: SFLYDIFWVF ISKMLFHESV MIVVARGDNT DEDGVPMLLK IPRMFDPWGG YSIIGFGDIL LPGLLVAFAL RYDWAARKTL QSGYFLWSMV AYGSGLLITY
401: IALNLMDGHG QPALLYIVPF MLGTFISLGK KQGKLRNLWM KGQRPRVCMH SHHPLKGSAD SASHVISS

Best Arabidopsis Sequence Match ( AT1G01650.2 )
(BLAST)

001: MVCEKGENVL DITIPVVMLP VDAGRSLENI VKSNAIVTLQ LYSPKRPAVD VAEVFLWLMA VGTILCASYW SAWTVREEAI EQDKLLKDGS DELLQLSTTS
101: SRGVVEVTVI SAILFVVVAS CFLIMLYKLM SFWFIEVLVV LFCIGGVEGL QTCLVSLLSC FRWFRRFGES YVKVPFLGAV SYLTLAICPF CIAFAVFWAV
201: KRQYSYAWIG QDILGISLII TVLQIVRVPN LKVGFVLLSC AFMYDIFWVF VSKWWFRESV MIVVARGDRS GEDGIPMLLK IPRMFDPWGG YSIIGFGDII
301: LPGLLVTFAL RYDWLANKRL KSGYFLGTMS AYGLGLLITY IALNLMDGHG QPALLYIVPF ILGTLFVLGH KRGDLKTLWT TGEPDRPCPH VRLQPQSS

Arabidopsis Description

SPPL4Signal peptide peptidase-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q0WMJ8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.