Factsheet for Solyc10g012430.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	golgi, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g094680.2.1	Tomato	plasma membrane	78.23	78.66
VIT_15s0046g02460.t01	Wine grape	plasma membrane	74.54	75.66
Bra033245.1-P	Field mustard	plasma membrane	67.71	74.29
VIT_02s0012g02640.t01	Wine grape	golgi, plasma membrane, plastid	20.3	73.33
KRH48125	Soybean	plasma membrane	73.06	73.2
KRH65010	Soybean	plasma membrane	73.06	73.06
KRH00766	Soybean	plasma membrane	72.32	72.73
CDX90049	Canola	plasma membrane	72.32	72.59
CDY38021	Canola	plasma membrane	72.32	72.59
KRH40447	Soybean	plasma membrane	72.14	72.54
CDY15163	Canola	plasma membrane	72.14	72.41
AT1G01650.1	Thale cress	plasma membrane	71.96	72.22
Bra032646.1-P	Field mustard	plasma membrane	71.59	71.99
GSMUA_Achr4P12000_001	Banana	plasma membrane	70.48	71.94
Solyc08g081180.2.1	Tomato	plasma membrane	70.3	70.04
GSMUA_Achr10P...	Banana	plasma membrane	66.97	68.23
Zm00001d014901_P001	Maize	plasma membrane	66.42	67.16
EER90450	Sorghum	plasma membrane	65.5	66.23
Os02t0823000-01	Rice	plasma membrane	65.87	65.5
Os06t0730900-01	Rice	plasma membrane	65.31	65.31
TraesCS6D01G389600.1	Wheat	plasma membrane	63.84	63.37
EES06047	Sorghum	plasma membrane	63.84	63.25
TraesCS6B01G451100.1	Wheat	plasma membrane	63.65	63.19
TraesCS6A01G406000.1	Wheat	plasma membrane	63.65	63.19
TraesCS7D01G543700.1	Wheat	plasma membrane	63.1	62.3
Zm00001d051873_P002	Maize	plasma membrane	62.18	61.5
TraesCS7A01G568900.1	Wheat	plasma membrane	63.47	60.88
TraesCS7B01G489700.3	Wheat	plasma membrane, vacuole	62.92	59.62
HORVU7Hr1G122650.3	Barley	nucleus, plasma membrane	62.73	55.65
Solyc09g098200.2.1	Tomato	plasma membrane	25.65	52.45
TraesCS4D01G010500.1	Wheat	plasma membrane	43.73	50.64
Solyc12g098670.1.1	Tomato	plasma membrane	41.14	41.92
Solyc11g064790.1.1	Tomato	plasma membrane	15.31	24.48
Solyc01g008820.2.1	Tomato	plasma membrane	14.94	23.96
Solyc03g025550.2.1	Tomato	plasma membrane	16.42	23.61

Protein Annotations

MapMan:18.10.1.4	Gene3D:3.50.30.30	MEROPS:A22.A05	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005764	GO:GO:0005765
GO:GO:0005773	GO:GO:0005783	GO:GO:0005794	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	GO:GO:0030660	GO:GO:0071458
GO:GO:0071556	UniProt:K4CYM0	InterPro:PA_domain	PFAM:PF02225	PFAM:PF04258	PANTHER:PTHR12174
PANTHER:PTHR12174:SF58	InterPro:Peptidase_A22B_SPP	InterPro:Preselin/SPP	SMART:SM00730	SUPFAM:SSF52025	SignalP:SignalP-noTM
EnsemblPlantsGene:Solyc10g012430.2	EnsemblPlants:Solyc10g012430.2.1	TMHMM:TMhelix	UniParc:UPI000276C388	SEG:seg	:

Description

No Description!

Coordinates

chr10:-:5095597..5108835

Molecular Weight (calculated)

59967.0 Da

IEP (calculated)

7.513

GRAVY (calculated)

0.509

Length

542 amino acids

Sequence
(BLAST)

001: MGFKRGVFSC CFCVVFAVVL LNSCVLVIGG DIVHQDNVAP HRPGCNNNFV LVKVPTWVNG NEVTQFVGLG ARFGPTLESK EKRANQTRLA FADPPDCCSM
101: PRNKLTSEAI LVHRGNCSFT TKAKVAEAAG ASAIIIINNQ TELFKMVCDP GESDVDIGIP AVMLPQDAGT SLIEFLRNSS TVSVQMYSPK RPAVDVAEVF
201: LWLMSVVTIL CASYWSAWSA REAAIEQDKF LKDGSDDYGG KEVTHSGGVL DINTISALLF VVVASCFLIM LYKLMSFWFI EVLVVLFCIG GVEGLQTCLV
301: TLLSCFRWFE HAQESFLKVP LLGPVSYLTL AISPFCLAFA IMWAVFRHVS FAWIGQDILG MALIITVLQI IRVPNLKVGT VLLTCAFFYD IFWVFVSKWV
401: FHKSVMIEVA RGYKSGEEGI PMLLKIPRIC DPWGGYSIIG FGDIILPGLL VAFSLRYDWL CKKSLRAGYF LWTMTAYGLG LFATYVALNL MDGHGQPALL
501: YIVPSTLGTF LMLSAKRGEL KHLWTRGEPY RICPHIQLQP AE

Best Arabidopsis Sequence Match ( AT1G01650.1 )
(BLAST)

001: MILWKSLSCF SFVFGLLLYS ASFVCAGDIV HHDDSLPQRP GCNNNFVLVK VPTRVNGSEY TEYVGVGARF GPTLESKEKH ATLIKLAIAD PPDCCSTPKN
101: KLTGEVILVH RGKCSFTTKT KVAEAAGASA ILIINNSTDL FKMVCEKGEN VLDITIPVVM LPVDAGRSLE NIVKSNAIVT LQLYSPKRPA VDVAEVFLWL
201: MAVGTILCAS YWSAWTVREE AIEQDKLLKD GSDELLQLST TSSRGVVEVT VISAILFVVV ASCFLIMLYK LMSFWFIEVL VVLFCIGGVE GLQTCLVSLL
301: SCFRWFRRFG ESYVKVPFLG AVSYLTLAIC PFCIAFAVFW AVKRQYSYAW IGQDILGISL IITVLQIVRV PNLKVGFVLL SCAFMYDIFW VFVSKWWFRE
401: SVMIVVARGD RSGEDGIPML LKIPRMFDPW GGYSIIGFGD IILPGLLVTF ALRYDWLANK RLKSGYFLGT MSAYGLGLLI TYIALNLMDG HGQPALLYIV
501: PFILGTLFVL GHKRGDLKTL WTTGEPDRPC PHVRLQPQSS

Arabidopsis Description

SPPL4Signal peptide peptidase-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q0WMJ8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.