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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:golgi, plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY38021 Canola plasma membrane 98.33 98.15
Bra033245.1-P Field mustard plasma membrane 84.97 92.71
AT1G01650.1 Thale cress plasma membrane 90.17 90.0
VIT_15s0046g02460.t01 Wine grape plasma membrane 74.03 74.72
Solyc01g094680.2.1 Tomato plasma membrane 72.91 72.91
KRH48125 Soybean plasma membrane 72.36 72.09
Solyc10g012430.2.1 Tomato plasma membrane 71.99 71.59
KRH00766 Soybean plasma membrane 71.24 71.24
GSMUA_Achr4P12000_001 Banana plasma membrane 70.13 71.19
KRH65010 Soybean plasma membrane 71.24 70.85
KRH40447 Soybean plasma membrane 70.69 70.69
EER90450 Sorghum plasma membrane 69.02 69.4
GSMUA_Achr10P... Banana plasma membrane 68.27 69.17
Zm00001d014901_P001 Maize plasma membrane 68.27 68.66
Bra027793.1-P Field mustard plasma membrane 68.65 68.65
Os06t0730900-01 Rice plasma membrane 67.9 67.53
VIT_02s0012g02640.t01 Wine grape golgi, plasma membrane, plastid 18.74 67.33
Os02t0823000-01 Rice plasma membrane 67.35 66.61
EES06047 Sorghum plasma membrane 66.23 65.27
TraesCS6A01G406000.1 Wheat plasma membrane 66.05 65.2
TraesCS7D01G543700.1 Wheat plasma membrane 66.23 65.03
TraesCS6D01G389600.1 Wheat plasma membrane 65.86 65.02
TraesCS6B01G451100.1 Wheat plasma membrane 65.68 64.84
TraesCS7A01G568900.1 Wheat plasma membrane 66.6 63.54
Zm00001d051873_P002 Maize plasma membrane 63.82 62.77
TraesCS7B01G489700.3 Wheat plasma membrane, vacuole 66.23 62.41
HORVU7Hr1G122650.3 Barley nucleus, plasma membrane 66.79 58.92
TraesCS4D01G010500.1 Wheat plasma membrane 46.38 53.42
Bra004741.1-P Field mustard plasma membrane 45.08 44.92
Bra030626.1-P Field mustard plasma membrane 42.86 42.7
Bra037737.1-P Field mustard plastid 30.24 40.45
Bra017402.1-P Field mustard golgi, plasma membrane 7.79 26.75
Bra036397.1-P Field mustard plasma membrane 7.05 26.03
Bra024788.1-P Field mustard plasma membrane 15.58 25.07
Bra026567.1-P Field mustard plasma membrane 15.77 24.78
Bra011437.1-P Field mustard endoplasmic reticulum, plasma membrane 15.96 23.12
Bra037008.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 15.21 22.22
Bra025596.1-P Field mustard plasma membrane 8.91 20.87
Protein Annotations
MapMan:18.10.1.4Gene3D:3.50.30.30MEROPS:A22.A03EnsemblPlantsGene:Bra032646EnsemblPlants:Bra032646.1EnsemblPlants:Bra032646.1-P
GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0005575GO:GO:0006508GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0019538UniProt:M4EV13
InterPro:PA_domainPFAM:PF02225PFAM:PF04258PANTHER:PTHR12174PANTHER:PTHR12174:SF58InterPro:Peptidase_A22B_SPP
InterPro:Preselin/SPPSMART:SM00730SUPFAM:SSF52025SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002543163
SEG:seg:::::
Description
AT1G01650 (E=6e-283) | aspartic-type endopeptidase/ peptidase
Coordinates
chrA09:-:37001808..37004928
Molecular Weight (calculated)
59490.7 Da
IEP (calculated)
7.549
GRAVY (calculated)
0.511
Length
539 amino acids
Sequence
(BLAST)
001: MIQRRSFSCL LYVLGLLLYS ASLVCGGDIV HHDDSIPQRP GCNNNFVLVK VPTRVDGKEK EEFVGVGARF GPTLESKEKH ATLIKLALAD PPHCCTTPKS
101: KLTGEVILVH RGNCSFTTKT KVAEAAGASA ILIINNSTDL FKMVCEKGEN VLDINIPVVM LPIDAGRSLE ETVQSNSIVT LQLYSPKRPA VDVAEVFLWL
201: MAVGTILCAS YWSAWTAREE AIAQDKLLKD GSDELLQVST TSSGGVVEIT VISAILFVVV ASCFLIMLYK LMSFWFIEVL VVLFCIGGVE GLQTCLVALL
301: SCFIWFRRIG ESYAKVPLLG EVSYLTLAVC PFCIVSAVIW AVYRQYPFAW IGQDILGISL IVTVLQIVRV PNLKVGVVLL SCGFMYDIFW VFVSKWWFRE
401: SVMIVVARGD KSGEDGIPML LKIPRMFDPW GGYSIIGFGD IILPGLLVTF ALRYDWLANK RLKSGYFLGT MSAYGLGLLI TYIALNLMDG HGQPALLYIV
501: PFILGTLTVL GHKRGDLKTL WTTGEPERPC PHVRLQHQS
Best Arabidopsis Sequence Match ( AT1G01650.1 )
(BLAST)
001: MILWKSLSCF SFVFGLLLYS ASFVCAGDIV HHDDSLPQRP GCNNNFVLVK VPTRVNGSEY TEYVGVGARF GPTLESKEKH ATLIKLAIAD PPDCCSTPKN
101: KLTGEVILVH RGKCSFTTKT KVAEAAGASA ILIINNSTDL FKMVCEKGEN VLDITIPVVM LPVDAGRSLE NIVKSNAIVT LQLYSPKRPA VDVAEVFLWL
201: MAVGTILCAS YWSAWTVREE AIEQDKLLKD GSDELLQLST TSSRGVVEVT VISAILFVVV ASCFLIMLYK LMSFWFIEVL VVLFCIGGVE GLQTCLVSLL
301: SCFRWFRRFG ESYVKVPFLG AVSYLTLAIC PFCIAFAVFW AVKRQYSYAW IGQDILGISL IITVLQIVRV PNLKVGFVLL SCAFMYDIFW VFVSKWWFRE
401: SVMIVVARGD RSGEDGIPML LKIPRMFDPW GGYSIIGFGD IILPGLLVTF ALRYDWLANK RLKSGYFLGT MSAYGLGLLI TYIALNLMDG HGQPALLYIV
501: PFILGTLFVL GHKRGDLKTL WTTGEPDRPC PHVRLQPQSS
Arabidopsis Description
SPPL4Signal peptide peptidase-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q0WMJ8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.