Factsheet for Solyc01g094680.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g012430.2.1	Tomato	plasma membrane	78.66	78.23
Bra033245.1-P	Field mustard	plasma membrane	69.57	75.91
VIT_15s0046g02460.t01	Wine grape	plasma membrane	75.14	75.84
CDX90049	Canola	plasma membrane	74.21	74.07
KRH00766	Soybean	plasma membrane	73.84	73.84
CDY15163	Canola	plasma membrane	73.84	73.7
AT1G01650.1	Thale cress	plasma membrane	73.84	73.7
KRH40447	Soybean	plasma membrane	73.65	73.65
KRH48125	Soybean	plasma membrane	73.84	73.57
CDY38021	Canola	plasma membrane	73.47	73.33
KRH65010	Soybean	plasma membrane	73.65	73.25
Bra032646.1-P	Field mustard	plasma membrane	72.91	72.91
GSMUA_Achr4P12000_001	Banana	plasma membrane	71.61	72.69
Solyc08g081180.2.1	Tomato	plasma membrane	71.8	71.14
VIT_02s0012g02640.t01	Wine grape	golgi, plasma membrane, plastid	19.67	70.67
GSMUA_Achr10P...	Banana	plasma membrane	68.27	69.17
Zm00001d014901_P001	Maize	plasma membrane	66.23	66.6
EER90450	Sorghum	plasma membrane	66.23	66.6
Os02t0823000-01	Rice	plasma membrane	66.79	66.06
TraesCS6D01G389600.1	Wheat	plasma membrane	66.05	65.2
TraesCS6B01G451100.1	Wheat	plasma membrane	65.86	65.02
TraesCS6A01G406000.1	Wheat	plasma membrane	65.86	65.02
Os06t0730900-01	Rice	plasma membrane	65.31	64.94
EES06047	Sorghum	plasma membrane	65.68	64.72
TraesCS7D01G543700.1	Wheat	plasma membrane	64.01	62.84
Zm00001d051873_P002	Maize	plasma membrane	63.27	62.23
TraesCS7A01G568900.1	Wheat	plasma membrane	64.19	61.24
TraesCS7B01G489700.3	Wheat	plasma membrane, vacuole	63.82	60.14
HORVU7Hr1G122650.3	Barley	nucleus, plasma membrane	64.19	56.63
TraesCS4D01G010500.1	Wheat	plasma membrane	45.27	52.14
Solyc09g098200.2.1	Tomato	plasma membrane	24.86	50.57
Solyc12g098670.1.1	Tomato	plasma membrane	41.0	41.54
Solyc11g064790.1.1	Tomato	plasma membrane	16.14	25.66
Solyc01g008820.2.1	Tomato	plasma membrane	15.58	24.85
Solyc03g025550.2.1	Tomato	plasma membrane	17.07	24.4

Protein Annotations

MapMan:18.10.1.4	Gene3D:3.50.30.30	MEROPS:A22.A05	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005764	GO:GO:0005765
GO:GO:0005773	GO:GO:0005783	GO:GO:0005794	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	GO:GO:0030660	GO:GO:0071458
GO:GO:0071556	UniProt:K4AZK9	InterPro:PA_domain	PFAM:PF02225	PFAM:PF04258	PANTHER:PTHR12174
PANTHER:PTHR12174:SF58	InterPro:Peptidase_A22B_SPP	InterPro:Preselin/SPP	SMART:SM00730	SUPFAM:SSF52025	SignalP:SignalP-TM
EnsemblPlantsGene:Solyc01g094680.2	EnsemblPlants:Solyc01g094680.2.1	TMHMM:TMhelix	UniParc:UPI0002768B55	SEG:seg	:

Description

No Description!

Coordinates

chr1:+:86122150..86134118

Molecular Weight (calculated)

59601.6 Da

IEP (calculated)

6.986

GRAVY (calculated)

0.511

Length

539 amino acids

Sequence
(BLAST)

001: MELKKLDCSI FAVFVVVVVL CTGLVSGGDI VHQDDIAPSR PGCNNNFVLV KVPIWVDGIE VTEFVGVGAR FGPTLESKEK RANQTRLAFA DPPDCCSTPR
101: NKLTGEAILV HRGNCSFTTK ANVAEDAGAS AILIINNQTE LFKMVCEPHE PDLDIGIPAI MLPQHAGTSL IKFLGNSSSV SVQLYSPKRP MVDVAEVFLW
201: LMAVATILCA SYWSAWRARE AAIEQDKLLK DGSNECNVTE GFRSGVVLEI NIISAVLFVV VASCFLIMLF KLMSSWFIEV LVVLFAIGGV EGLQTCLVAL
301: LSCFRWFERF GQSYIKIPFL GPVSYLTLAI SPFCIAFAVL WAVYRHISFA WIGQDILGIA LIITVLQVVQ IPNLKVGTVL LSCSLLYDLF WVFLSKSLFH
401: KSVMIVVARG DKTGEDGIPM LLKIPRLFDP WHGYSIIGFG DIILPGLLVA FSLRYDWLCN KKLRDGYFLW AMLAYGLGLL TTYVALNLMD GHGQPALLYI
501: VPFTLGTFLT LGKQRGDLKH LWTRGEPDRP CPHVRLQPE

Best Arabidopsis Sequence Match ( AT1G01650.1 )
(BLAST)

001: MILWKSLSCF SFVFGLLLYS ASFVCAGDIV HHDDSLPQRP GCNNNFVLVK VPTRVNGSEY TEYVGVGARF GPTLESKEKH ATLIKLAIAD PPDCCSTPKN
101: KLTGEVILVH RGKCSFTTKT KVAEAAGASA ILIINNSTDL FKMVCEKGEN VLDITIPVVM LPVDAGRSLE NIVKSNAIVT LQLYSPKRPA VDVAEVFLWL
201: MAVGTILCAS YWSAWTVREE AIEQDKLLKD GSDELLQLST TSSRGVVEVT VISAILFVVV ASCFLIMLYK LMSFWFIEVL VVLFCIGGVE GLQTCLVSLL
301: SCFRWFRRFG ESYVKVPFLG AVSYLTLAIC PFCIAFAVFW AVKRQYSYAW IGQDILGISL IITVLQIVRV PNLKVGFVLL SCAFMYDIFW VFVSKWWFRE
401: SVMIVVARGD RSGEDGIPML LKIPRMFDPW GGYSIIGFGD IILPGLLVTF ALRYDWLANK RLKSGYFLGT MSAYGLGLLI TYIALNLMDG HGQPALLYIV
501: PFILGTLFVL GHKRGDLKTL WTTGEPDRPC PHVRLQPQSS

Arabidopsis Description

SPPL4Signal peptide peptidase-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q0WMJ8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.