Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 9
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025596.1-P | Field mustard | plasma membrane | 92.47 | 58.7 |
| CDY29483 | Canola | cytosol | 45.89 | 41.36 |
| Bra011437.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 91.78 | 36.02 |
| Bra037008.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid | 87.67 | 34.69 |
| AT4G33410.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 86.99 | 34.14 |
| VIT_16s0050g00580.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 80.14 | 31.54 |
| PGSC0003DMT400040816 | Potato | plasma membrane | 76.71 | 31.46 |
| KRH35289 | Soybean | endoplasmic reticulum, plasma membrane | 79.45 | 31.18 |
| KRG91538 | Soybean | endoplasmic reticulum, plasma membrane | 79.45 | 31.18 |
| Zm00001d049930_P003 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 76.71 | 30.19 |
| Os10t0393100-01 | Rice | plasma membrane | 76.71 | 30.19 |
| Zm00001d031933_P003 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 76.71 | 30.11 |
| KXG25380 | Sorghum | plasma membrane | 76.03 | 29.92 |
| Solyc03g025550.2.1 | Tomato | plasma membrane | 76.71 | 29.71 |
| TraesCS7A01G280600.1 | Wheat | plasma membrane | 73.97 | 29.03 |
| HORVU7Hr1G059420.1 | Barley | plasma membrane | 73.97 | 29.03 |
| TraesCS7B01G181000.2 | Wheat | plasma membrane | 73.97 | 29.03 |
| TraesCS7D01G279200.2 | Wheat | plasma membrane | 73.97 | 29.03 |
| GSMUA_Achr3P14450_001 | Banana | endoplasmic reticulum, plasma membrane | 73.29 | 28.76 |
| Bra017402.1-P | Field mustard | golgi, plasma membrane | 17.12 | 15.92 |
| Bra024788.1-P | Field mustard | plasma membrane | 26.03 | 11.34 |
| Bra026567.1-P | Field mustard | plasma membrane | 26.03 | 11.08 |
| Bra037737.1-P | Field mustard | plastid | 28.77 | 10.42 |
| Bra004741.1-P | Field mustard | plasma membrane | 30.82 | 8.32 |
| Bra033245.1-P | Field mustard | plasma membrane | 26.71 | 7.89 |
| Bra030626.1-P | Field mustard | plasma membrane | 26.71 | 7.21 |
| Bra032646.1-P | Field mustard | plasma membrane | 26.03 | 7.05 |
| Bra027793.1-P | Field mustard | plasma membrane | 25.34 | 6.86 |
Protein Annotations
| EnsemblPlants:Bra036397.1 | EnsemblPlants:Bra036397.1-P | EnsemblPlantsGene:Bra036397 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 |
| GO:GO:0005575 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0019538 | InterPro:Peptidase_A22B_SPP | PANTHER:PTHR12174 | PANTHER:PTHR12174:SF22 | PFAM:PF04258 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0002541211 | UniProt:M4F5P1 | MapMan:18.10.1.4 | : |
Description
AT4G33410 (E=1e-060) | signal peptide peptidase family protein
Coordinates
chrA07:-:2268589..2269029
Molecular Weight (calculated)
15979.1 Da
IEP (calculated)
6.766
GRAVY (calculated)
0.843
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MQGLLLVACA VTVVAWLVSG HWVLNNLLGI SIFIAFVSHV RLPNIKICAM LLLCLFVYDI FWVFFSERVF GANVMVTVAT QQASNPVHTV ANSLNLPGLE
101: LITKKLELPV KIMFPRNLLG GVEPGVSSSE FMMLGLGDMV TDQSQT
101: LITKKLELPV KIMFPRNLLG GVEPGVSSSE FMMLGLGDMV TDQSQT
001: METLWTLLYL LEPAPATLIV TAVTVTFASA FRALNYGKEM ERNRDFSEAS ITLDSSQALM IPVMSSCSLL LMFYLFSSVS QLLTAFTAIA SVSSLFYWLS
101: PYAVYMKTQL GLSDPFLSRC CSKSFTRIQG LLLVACAMTV VAWLISGHWV LNNLLGISIC IAFVSHVRLP NIKICAMLLV CLFVYDIFWV FFSERFFGAN
201: VMVAVATQQA SNPVHTVANS LNLPGLQLIT KKLELPVKIV FPRNLLGGVV PGVSASDFMM LGLGDMAIPA MLLALVLCFD HRKTRDVVNI FDLKSSKGHK
301: YIWYALPGYA IGLVAALAAG VLTHSPQPAL LYLVPSTLGP VIFMSWRRKD LAELWEGPAL SNPIEKSHEI EI
101: PYAVYMKTQL GLSDPFLSRC CSKSFTRIQG LLLVACAMTV VAWLISGHWV LNNLLGISIC IAFVSHVRLP NIKICAMLLV CLFVYDIFWV FFSERFFGAN
201: VMVAVATQQA SNPVHTVANS LNLPGLQLIT KKLELPVKIV FPRNLLGGVV PGVSASDFMM LGLGDMAIPA MLLALVLCFD HRKTRDVVNI FDLKSSKGHK
301: YIWYALPGYA IGLVAALAAG VLTHSPQPAL LYLVPSTLGP VIFMSWRRKD LAELWEGPAL SNPIEKSHEI EI
Arabidopsis Description
SPPL1Signal peptide peptidase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z32]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.