Factsheet for Bra026567.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 8
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003423.1-P
Bra007547.1-P
Bra012567.1-P
Bra013361.1-P
Bra014481.1-P
Bra027174.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G03120.1	Bra027174.1-P	AT3G16310.1	21798944
AT2G03120.1	Bra003423.1-P	AT3G60600.1	21798944
AT2G03120.1	Bra007547.1-P	AT3G60600.1	21798944
AT2G03120.1	Bra014481.1-P	AT3G60600.1	21798944
AT2G03120.1	Bra012567.1-P	AT4G19030.1	21798944
AT2G03120.1	Bra013361.1-P	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64408	Canola	plasma membrane	99.71	99.71
CDY45179	Canola	plasma membrane	95.63	97.91
Bra024788.1-P	Field mustard	plasma membrane	95.63	97.91
CDY03017	Canola	plasma membrane	95.34	97.61
Bra017402.1-P	Field mustard	golgi, plasma membrane	41.98	91.72
AT2G03120.1	Thale cress	plasma membrane	90.96	90.7
KRH62014	Soybean	endoplasmic reticulum	81.34	81.82
KRH52673	Soybean	plasma membrane	81.34	81.82
PGSC0003DMT400024446	Potato	plasma membrane	78.13	79.76
VIT_06s0009g03520.t01	Wine grape	plasma membrane	79.01	79.47
KRH16232	Soybean	plasma membrane	79.01	79.47
PGSC0003DMT400058489	Potato	plasma membrane	78.13	79.29
Solyc01g008820.2.1	Tomato	plasma membrane	78.13	79.29
Solyc11g064790.1.1	Tomato	plasma membrane	78.13	79.06
Os05t0436400-03	Rice	plasma membrane	65.6	78.67
TraesCS6B01G064500.2	Wheat	plasma membrane	77.84	78.3
Os02t0117400-01	Rice	plasma membrane	78.13	78.13
TraesCS6B01G064600.2	Wheat	plasma membrane	77.26	77.71
EES04366	Sorghum	golgi, plasma membrane	77.84	77.62
Zm00001d015006_P004	Maize	plasma membrane	78.43	77.52
HORVU6Hr1G009670.1	Barley	plasma membrane	76.97	77.19
TraesCS3B01G545500.1	Wheat	plasma membrane	76.97	76.74
TraesCS3D01G492200.1	Wheat	plasma membrane	76.68	76.45
TraesCSU01G107100.2	Wheat	plasma membrane	76.09	76.32
TraesCS6A01G048100.2	Wheat	plasma membrane	76.09	76.32
KXG37644	Sorghum	plasma membrane	76.68	74.5
HORVU3Hr1G108010.6	Barley	plasma membrane	74.93	74.28
GSMUA_Achr4P16430_001	Banana	extracellular, plasma membrane, vacuole	26.24	64.29
Zm00001d015005_P002	Maize	plasma membrane	40.52	58.4
Zm00001d054017_P003	Maize	plasma membrane	77.84	49.17
OQU87114	Sorghum	plasma membrane	38.19	36.39
Bra037008.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	28.28	26.29
Bra036397.1-P	Field mustard	plasma membrane	11.08	26.03
Bra011437.1-P	Field mustard	endoplasmic reticulum, plasma membrane	27.11	25.0
Bra025596.1-P	Field mustard	plasma membrane	12.54	18.7
Bra033245.1-P	Field mustard	plasma membrane	24.78	17.21
Bra032646.1-P	Field mustard	plasma membrane	24.78	15.77
Bra004741.1-P	Field mustard	plasma membrane	24.49	15.53
Bra027793.1-P	Field mustard	plasma membrane	23.62	15.03
Bra030626.1-P	Field mustard	plasma membrane	22.74	14.42
Bra037737.1-P	Field mustard	plastid	16.62	14.14

Protein Annotations

MapMan:18.10.1.4	MEROPS:A22.A15	EnsemblPlantsGene:Bra026567	EnsemblPlants:Bra026567.1	EnsemblPlants:Bra026567.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	UniProt:M4ECQ7	PFAM:PF04258
PFscan:PS51257	PANTHER:PTHR12174	PANTHER:PTHR12174:SF23	InterPro:Peptidase_A22B_SPP	InterPro:Preselin/SPP	SMART:SM00730
TMHMM:TMhelix	UniParc:UPI00025466E3	SEG:seg	:	:	:

Description

AT2G03120 (E=4e-159) ATSPP | ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE); aspartic-type endopeptidase

Coordinates

chrA02:-:20305785..20308056

Molecular Weight (calculated)

37917.8 Da

IEP (calculated)

8.559

GRAVY (calculated)

0.600

Length

343 amino acids

Sequence
(BLAST)

001: MKNCERIANL ALAGLTVAPL VVNVNPNLNV VLTACLTVYV GCFRSVKDSP PTETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIV
101: ALSATLLPAI SRFLPKPWND NLIVWRFPYF KSVEVEFTKS QVIAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LVGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRSK PQYFTSAFVG YVAGVVLTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLMAFD ESSKSTEEES KSSEGEVNKS HAE

Best Arabidopsis Sequence Match ( AT2G03120.1 )
(BLAST)

001: MKNCERFANL ALAGLTLAPL VVRVNPNLNV ILTACITVYV GCFRSVKDTP PTETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIV
101: ALSATLLPAI RRFLPNPWND NLIVWRFPYF KSLEVEFTKS QVVAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRRQ PQYFTSAFIG YAVGVILTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLLAFD ESKTEEATTD ESKTSEEVNK AHDE

Arabidopsis Description

SPPSignal peptide peptidase [Source:UniProtKB/Swiss-Prot;Acc:O81062]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.