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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 8
  • golgi 6
  • plastid 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g008820.2.1 Tomato plasma membrane 97.63 97.63
PGSC0003DMT400024446 Potato plasma membrane 89.64 90.18
VIT_06s0009g03520.t01 Wine grape plasma membrane 85.5 84.75
KRH62014 Soybean endoplasmic reticulum 84.62 83.87
KRH52673 Soybean plasma membrane 84.02 83.28
KRH16232 Soybean plasma membrane 83.43 82.7
Bra024788.1-P Field mustard plasma membrane 79.59 80.3
CDY45179 Canola plasma membrane 79.59 80.3
CDY03017 Canola plasma membrane 79.59 80.3
AT2G03120.1 Thale cress plasma membrane 81.66 80.23
CDX88296 Canola plasma membrane 70.12 80.07
CDY60831 Canola plasma membrane 79.29 79.76
CDY17419 Canola plasma membrane 78.99 79.46
EES04366 Sorghum golgi, plasma membrane 80.77 79.36
TraesCS6B01G064500.2 Wheat plasma membrane 79.29 78.59
Zm00001d015006_P004 Maize plasma membrane 80.47 78.39
Os02t0117400-01 Rice plasma membrane 79.29 78.13
Bra026567.1-P Field mustard plasma membrane 79.29 78.13
CDY64408 Canola plasma membrane 79.29 78.13
TraesCSU01G107100.2 Wheat plasma membrane 78.99 78.07
TraesCS6B01G064600.2 Wheat plasma membrane 78.7 78.01
CDY09342 Canola plasma membrane 78.99 77.84
HORVU6Hr1G009670.1 Barley plasma membrane 78.4 77.49
Os05t0436400-03 Rice plasma membrane 65.38 77.27
TraesCS6A01G048100.2 Wheat plasma membrane 78.11 77.19
TraesCS3B01G545500.1 Wheat plasma membrane 77.81 76.45
TraesCS3D01G492200.1 Wheat plasma membrane 77.81 76.45
KXG37644 Sorghum plasma membrane 79.59 76.2
HORVU3Hr1G108010.6 Barley plasma membrane 76.33 74.57
CDY03016 Canola extracellular, golgi, plasma membrane 27.81 71.76
GSMUA_Achr4P16430_001 Banana extracellular, plasma membrane, vacuole 26.04 62.86
Zm00001d015005_P002 Maize plasma membrane 39.65 56.3
Zm00001d054017_P003 Maize plasma membrane 81.95 51.01
OQU87114 Sorghum plasma membrane 37.87 35.56
PGSC0003DMT400040816 Potato plasma membrane 26.92 25.56
PGSC0003DMT400031075 Potato cytosol, peroxisome, plasma membrane 21.89 24.58
PGSC0003DMT400032136 Potato plasma membrane 26.04 16.18
PGSC0003DMT400011660 Potato plasma membrane 23.67 15.04
Protein Annotations
MapMan:18.10.1.4MEROPS:A22.A15EMBL:AM231414ProteinID:CAJ77509ProteinID:CAJ77509.1GO:GO:0003674
GO:GO:0003824GO:GO:0004190GO:GO:0005575GO:GO:0006508GO:GO:0008150GO:GO:0008152
GO:GO:0008233GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0019538UniProt:M1C2R5
PFAM:PF04258EnsemblPlantsGene:PGSC0003DMG400022714PGSC:PGSC0003DMG400022714EnsemblPlants:PGSC0003DMT400058489PANTHER:PTHR12174PANTHER:PTHR12174:SF23
InterPro:Peptidase_A22B_SPPInterPro:Preselin/SPPSMART:SM00730TMHMM:TMhelixUniParc:UPI000295AF07SEG:seg
Description
Minor histocompatibility antigen H13 [Source:PGSC_GENE;Acc:PGSC0003DMG400022714]
Coordinates
chr1:+:5120127..5126327
Molecular Weight (calculated)
37454.3 Da
IEP (calculated)
8.195
GRAVY (calculated)
0.598
Length
338 amino acids
Sequence
(BLAST)
001: MNSERLANIA LAGLSLAPLV VNVDPNLNVV LTACLTVFVG CYRSVKPTPP SETMSKEHAM RFPLVGSAML LSLFLLFKFL SKDLVNAVLT CYFFVLGIAA
101: FSATLLPSIK RFLPEKWNED LVIWHFPYFR SLEFEFTRSQ IVAAIPGTMF CVWYAKQKHW LANNVLGLAF SIQGIEMLSL GSFKTGAILL AGLFVYDIFW
201: VFFTPVMVSV AKSFDAPIKL LFPTSDLKRP FSMLGLGDIV IPGIFVALAL RFDVSRGKGP QYFKSAFSGY AVGVISTIIV MNWFQAAQPA LLYIVPAVIG
301: FLAVHCIWNG DVKPLLEFDE SKTQSTEEVA AEESKKVE
Best Arabidopsis Sequence Match ( AT2G03120.1 )
(BLAST)
001: MKNCERFANL ALAGLTLAPL VVRVNPNLNV ILTACITVYV GCFRSVKDTP PTETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIV
101: ALSATLLPAI RRFLPNPWND NLIVWRFPYF KSLEVEFTKS QVVAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRRQ PQYFTSAFIG YAVGVILTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLLAFD ESKTEEATTD ESKTSEEVNK AHDE
Arabidopsis Description
SPPSignal peptide peptidase [Source:UniProtKB/Swiss-Prot;Acc:O81062]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.