Factsheet for Zm00001d054017_P003

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d008871_P001
Zm00001d010783_P001
Zm00001d017390_P001
Zm00001d025939_P003
Zm00001d036342_P001
Zm00001d038803_P001
Zm00001d049553_P001
Zm00001d051288_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G03120.1	Zm00001d008871_P001	AT3G16310.1	21798944
AT2G03120.1	Zm00001d010783_P001	AT3G16310.1	21798944
AT2G03120.1	Zm00001d038803_P001	AT3G16310.1	21798944
AT2G03120.1	Zm00001d017390_P001	AT3G60600.1	21798944
AT2G03120.1	Zm00001d025939_P003	AT3G60600.1	21798944
AT2G03120.1	Zm00001d036342_P001	AT3G60600.1	21798944
AT2G03120.1	Zm00001d049553_P001	AT3G60600.1	21798944
AT2G03120.1	Zm00001d051288_P001	AT3G60600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04366	Sorghum	golgi, plasma membrane	60.59	95.64
Zm00001d015006_P004	Maize	plasma membrane	59.3	92.8
KXG37644	Sorghum	plasma membrane	59.67	91.78
Os05t0436400-03	Rice	plasma membrane	46.22	87.76
Os02t0117400-01	Rice	plasma membrane	55.43	87.76
TraesCS6B01G064500.2	Wheat	plasma membrane	54.33	86.51
TraesCSU01G107100.2	Wheat	plasma membrane	54.14	85.96
TraesCS6B01G064600.2	Wheat	plasma membrane	53.96	85.92
TraesCS3D01G492200.1	Wheat	plasma membrane	54.14	85.47
TraesCS6A01G048100.2	Wheat	plasma membrane	53.78	85.38
TraesCS3B01G545500.1	Wheat	plasma membrane	53.96	85.17
HORVU6Hr1G009670.1	Barley	plasma membrane	53.59	85.09
GSMUA_Achr5P08750_001	Banana	plasma membrane	52.49	82.61
CDX88296	Canola	plasma membrane	44.94	82.43
PGSC0003DMT400058489	Potato	plasma membrane	51.01	81.95
Solyc01g008820.2.1	Tomato	plasma membrane	50.64	81.36
PGSC0003DMT400024446	Potato	plasma membrane	50.28	81.25
HORVU3Hr1G108010.6	Barley	plasma membrane	51.75	81.21
KRH16232	Soybean	plasma membrane	50.64	80.65
KRH52673	Soybean	plasma membrane	50.64	80.65
KRH62014	Soybean	endoplasmic reticulum	50.64	80.65
Solyc11g064790.1.1	Tomato	plasma membrane	50.28	80.53
CDY60831	Canola	plasma membrane	49.54	80.06
VIT_06s0009g03520.t01	Wine grape	plasma membrane	50.09	79.77
CDY17419	Canola	plasma membrane	49.36	79.76
CDY45179	Canola	plasma membrane	49.17	79.7
CDY03017	Canola	plasma membrane	49.17	79.7
Bra024788.1-P	Field mustard	plasma membrane	49.17	79.7
AT2G03120.1	Thale cress	plasma membrane	49.72	78.49
CDY64408	Canola	plasma membrane	49.17	77.84
CDY09342	Canola	plasma membrane	49.17	77.84
Bra026567.1-P	Field mustard	plasma membrane	49.17	77.84
Bra017402.1-P	Field mustard	golgi, plasma membrane	21.73	75.16
GSMUA_Achr1P24450_001	Banana	plasma membrane	41.07	73.36
CDY03016	Canola	extracellular, golgi, plasma membrane	16.02	66.41
Zm00001d015005_P002	Maize	plasma membrane	28.91	65.97
Zm00001d049930_P003	Maize	endoplasmic reticulum, plasma membrane, vacuole	19.34	28.3
Zm00001d031933_P003	Maize	endoplasmic reticulum, plasma membrane, vacuole	19.15	27.96
Zm00001d014901_P001	Maize	plasma membrane	18.42	18.66
Zm00001d051873_P002	Maize	plasma membrane	17.31	17.15
Zm00001d042378_P001	Maize	plasma membrane	16.21	17.12
Zm00001d004702_P006	Maize	plasma membrane	16.39	11.65

Protein Annotations

EntrezGene:100272510	EntrezGene:100272679	MapMan:18.10.1.4	UniProt:A0A1D6QUM7	ProteinID:AQK61079.1	InterPro:DUF3456
GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	PFAM:PF04258
PFAM:PF11938	PANTHER:PTHR12174	PANTHER:PTHR12174:SF23	InterPro:Peptidase_A22B_SPP	InterPro:Preselin/SPP	SMART:SM00730
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0008425F7B	EnsemblPlantsGene:Zm00001d054017	EnsemblPlants:Zm00001d054017_P003	EnsemblPlants:Zm00001d054017_T003
SEG:seg	:	:	:	:	:

Description

Signal peptide peptidase

Coordinates

chr4:-:245195523..245206342

Molecular Weight (calculated)

59532.8 Da

IEP (calculated)

6.950

GRAVY (calculated)

0.366

Length

543 amino acids

Sequence
(BLAST)

001: MEPRSAIYRS GAFLLLAAIL AEVVIPASAI GDKCAACKAV AAELEIGISS LESGEKGWVK VTDWNSFQTE NKAAARAHSK KLSTFCGRLL EETEDELSEW
101: IKTTSTESEY VSKALCEDIS KHCRSTRYVI PDNGLLCLHI KIFMLPSRLM MSYDMPGAGR CFAKSKTGDS TAEQNTQLLD CGLRHLASLL PDCFLIMMTH
201: EWAANLALAG LSLAPLVVNV NPNVNVVLTA CLTVYVGCYR SVKPTPPSET MSKEHAMRFP LVGSAMLLSL FLLFKFLSKD LVNAVLTAYF FILGIVALSA
301: TLLPSIKRFL PKEWNDNLIV WRAPLFHSLS VEFTKSQIVA SIPGFFFCLW YASKKHWLAN NVLGLAFCIQ GIEMLSLGSF KTGAILLGGL FVYDIFWVFF
401: TPVMVSVAKS FDAPIKLLFP TADDARPFSM LGLGDIVIPG IFVALALRFD VSRGIKKRYF NSAFSGYAVG MAVTIIVMNW FQAAQPALLY LVPGVIGFVA
501: VHCLWYGEVK QLLEFDESKA EAEEGGAEGE QDGDGSKASK KVD

Best Arabidopsis Sequence Match ( AT2G03120.1 )
(BLAST)

001: MKNCERFANL ALAGLTLAPL VVRVNPNLNV ILTACITVYV GCFRSVKDTP PTETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIV
101: ALSATLLPAI RRFLPNPWND NLIVWRFPYF KSLEVEFTKS QVVAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRRQ PQYFTSAFIG YAVGVILTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLLAFD ESKTEEATTD ESKTSEEVNK AHDE

Arabidopsis Description

SPPSignal peptide peptidase [Source:UniProtKB/Swiss-Prot;Acc:O81062]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.