Subcellular Localization
min:
: max
Winner_takes_all: extracellular, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 6
- plasma membrane 6
- endoplasmic reticulum 5
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03017 | Canola | plasma membrane | 89.31 | 34.93 |
| CDY45179 | Canola | plasma membrane | 88.55 | 34.63 |
| CDY64408 | Canola | plasma membrane | 87.02 | 33.24 |
| CDY09342 | Canola | plasma membrane | 85.5 | 32.65 |
| CDY60831 | Canola | plasma membrane | 81.68 | 31.85 |
| CDY17419 | Canola | plasma membrane | 81.68 | 31.85 |
| Os05t0436400-03 | Rice | plasma membrane | 68.7 | 31.47 |
| PGSC0003DMT400024446 | Potato | plasma membrane | 73.28 | 28.57 |
| Solyc11g064790.1.1 | Tomato | plasma membrane | 73.28 | 28.32 |
| PGSC0003DMT400058489 | Potato | plasma membrane | 71.76 | 27.81 |
| VIT_06s0009g03520.t01 | Wine grape | plasma membrane | 70.99 | 27.27 |
| Solyc01g008820.2.1 | Tomato | plasma membrane | 70.23 | 27.22 |
| Os02t0117400-01 | Rice | plasma membrane | 67.94 | 25.95 |
| Zm00001d015006_P004 | Maize | plasma membrane | 67.94 | 25.65 |
| TraesCS6B01G064600.2 | Wheat | plasma membrane | 66.41 | 25.51 |
| HORVU6Hr1G009670.1 | Barley | plasma membrane | 66.41 | 25.44 |
| TraesCS6B01G064500.2 | Wheat | plasma membrane | 65.65 | 25.22 |
| TraesCS6A01G048100.2 | Wheat | plasma membrane | 65.65 | 25.15 |
| TraesCS3B01G545500.1 | Wheat | plasma membrane | 65.65 | 25.0 |
| CDX88296 | Canola | plasma membrane | 56.49 | 25.0 |
| EES04366 | Sorghum | golgi, plasma membrane | 65.65 | 25.0 |
| TraesCS3D01G492200.1 | Wheat | plasma membrane | 64.89 | 24.71 |
| TraesCSU01G107100.2 | Wheat | plasma membrane | 63.36 | 24.27 |
| KXG37644 | Sorghum | plasma membrane | 64.89 | 24.08 |
| HORVU3Hr1G108010.6 | Barley | plasma membrane | 61.83 | 23.41 |
| Zm00001d054017_P003 | Maize | plasma membrane | 66.41 | 16.02 |
| OQU87114 | Sorghum | plasma membrane | 42.75 | 15.56 |
| CDY53660 | Canola | plasma membrane | 27.48 | 13.04 |
| Zm00001d015005_P002 | Maize | plasma membrane | 22.9 | 12.61 |
| CDX72401 | Canola | endoplasmic reticulum, plasma membrane | 30.53 | 10.84 |
| CDY71437 | Canola | plasma membrane | 30.53 | 10.84 |
| CDY46118 | Canola | endoplasmic reticulum, plasma membrane | 30.53 | 10.84 |
| CDX75349 | Canola | plasma membrane | 30.53 | 10.75 |
| CDX68973 | Canola | endoplasmic reticulum, plasma membrane | 29.77 | 10.48 |
| CDX67547 | Canola | plasma membrane | 12.21 | 9.14 |
| CDY56345 | Canola | plasma membrane | 25.95 | 7.61 |
| CDY38021 | Canola | plasma membrane | 30.53 | 7.41 |
| CDY15163 | Canola | plasma membrane | 30.53 | 7.41 |
| CDX90049 | Canola | plasma membrane | 30.53 | 7.41 |
| CDY45351 | Canola | plasma membrane | 29.77 | 7.24 |
| CDY08318 | Canola | plasma membrane | 29.77 | 7.24 |
| CDY53658 | Canola | plasma membrane | 28.24 | 6.84 |
| CDY63797 | Canola | plasma membrane | 26.72 | 6.47 |
| CDX86551 | Canola | plasma membrane | 25.95 | 6.28 |
| CDY29483 | Canola | cytosol | 7.63 | 6.17 |
| CDY30380 | Canola | plasma membrane, plastid | 20.61 | 5.62 |
| GSMUA_Achr4P16430_001 | Banana | extracellular, plasma membrane, vacuole | 5.34 | 5.0 |
| CDY55505 | Canola | plasma membrane | 28.24 | 4.68 |
Protein Annotations
| MapMan:18.10.1.4 | GO:A0A078EPC4 | MEROPS:A22.A15 | EnsemblPlants:CDY03016 | ProteinID:CDY03016 | ProteinID:CDY03016.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00115326001 | PFAM:PF04258 | PANTHER:PTHR12174 | PANTHER:PTHR12174:SF23 | InterPro:Peptidase_A22B_SPP |
| SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0004EEABB1 | : | : | : |
Description
BnaC07g22110D
Coordinates
chrLK031939:-:378359..380158
Molecular Weight (calculated)
14426.7 Da
IEP (calculated)
4.990
GRAVY (calculated)
0.551
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTVQSSLFF YGFMPLLLFP TGDALRPYSM LGLGDIVIPG IFVALALRFD VSRRSKPQYF TSAFLGYVAG VVLTIVVMNW FQAAQPALLY IVPAVIGFLA
101: SHCIWNGDIK PLMAFDESKT TEGEVDKAHE E
101: SHCIWNGDIK PLMAFDESKT TEGEVDKAHE E
001: MKNCERFANL ALAGLTLAPL VVRVNPNLNV ILTACITVYV GCFRSVKDTP PTETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIV
101: ALSATLLPAI RRFLPNPWND NLIVWRFPYF KSLEVEFTKS QVVAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRRQ PQYFTSAFIG YAVGVILTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLLAFD ESKTEEATTD ESKTSEEVNK AHDE
101: ALSATLLPAI RRFLPNPWND NLIVWRFPYF KSLEVEFTKS QVVAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRRQ PQYFTSAFIG YAVGVILTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLLAFD ESKTEEATTD ESKTSEEVNK AHDE
Arabidopsis Description
SPPSignal peptide peptidase [Source:UniProtKB/Swiss-Prot;Acc:O81062]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.