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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • golgi 6
  • plasma membrane 8
  • endoplasmic reticulum 6
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:endoplasmic reticulum
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G076010.1
HORVU2Hr1G091830.4
HORVU3Hr1G026980.2
HORVU3Hr1G071060.1
HORVU6Hr1G060760.3
HORVU7Hr1G071270.2
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G03120.1 HORVU1Hr1G076010.1 AT3G16310.1 21798944
AT2G03120.1 HORVU3Hr1G026980.2 AT3G16310.1 21798944
AT2G03120.1 HORVU3Hr1G071060.1 AT3G16310.1 21798944
AT2G03120.1 HORVU2Hr1G091830.4 AT3G60600.1 21798944
AT2G03120.1 HORVU6Hr1G060760.3 AT3G60600.1 21798944
AT2G03120.1 HORVU7Hr1G071270.2 AT3G60600.1 21798944
AT2G03120.1 HORVU7Hr1G088900.1 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCSU01G107100.2 Wheat plasma membrane 95.91 95.91
TraesCS6B01G064600.2 Wheat plasma membrane 95.61 95.89
TraesCS6B01G064500.2 Wheat plasma membrane 95.61 95.89
TraesCS6A01G048100.2 Wheat plasma membrane 95.61 95.61
Os02t0117400-01 Rice plasma membrane 87.72 87.46
Os05t0436400-03 Rice plasma membrane 71.93 86.01
HORVU3Hr1G108010.6 Barley plasma membrane 86.55 85.55
EES04366 Sorghum golgi, plasma membrane 84.5 84.01
Zm00001d015006_P004 Maize plasma membrane 82.75 81.56
GSMUA_Achr5P08750_001 Banana plasma membrane 81.29 80.58
CDX88296 Canola plasma membrane 69.59 80.41
KXG37644 Sorghum plasma membrane 82.75 80.17
PGSC0003DMT400024446 Potato plasma membrane 78.36 79.76
KRH52673 Soybean plasma membrane 78.95 79.18
VIT_06s0009g03520.t01 Wine grape plasma membrane 78.66 78.89
KRH62014 Soybean endoplasmic reticulum 78.66 78.89
CDY03017 Canola plasma membrane 77.19 78.81
Solyc11g064790.1.1 Tomato plasma membrane 78.07 78.76
CDY45179 Canola plasma membrane 76.9 78.51
Bra024788.1-P Field mustard plasma membrane 76.9 78.51
PGSC0003DMT400058489 Potato plasma membrane 77.49 78.4
KRH16232 Soybean plasma membrane 78.07 78.3
Solyc01g008820.2.1 Tomato plasma membrane 77.19 78.11
CDY60831 Canola plasma membrane 76.61 77.98
CDY17419 Canola plasma membrane 76.32 77.68
AT2G03120.1 Thale cress plasma membrane 78.07 77.62
CDY09342 Canola plasma membrane 77.19 76.97
Bra026567.1-P Field mustard plasma membrane 77.19 76.97
CDY64408 Canola plasma membrane 76.9 76.68
Bra017402.1-P Field mustard golgi, plasma membrane 34.8 75.8
GSMUA_Achr1P24450_001 Banana plasma membrane 63.16 71.05
CDY03016 Canola extracellular, golgi, plasma membrane 25.44 66.41
Zm00001d015005_P002 Maize plasma membrane 42.4 60.92
Zm00001d054017_P003 Maize plasma membrane 85.09 53.59
OQU87114 Sorghum plasma membrane 42.4 40.28
HORVU7Hr1G059420.1 Barley plasma membrane 30.12 27.69
HORVU3Hr1G093180.1 Barley golgi, plasma membrane 23.1 14.36
HORVU7Hr1G122650.3 Barley nucleus, plasma membrane 24.85 13.91
HORVU7Hr1G000380.6 Barley plasma membrane 20.47 13.08
Protein Annotations
MapMan:18.10.1.4GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0005575GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0019538
EnsemblPlantsGene:HORVU6Hr1G009670EnsemblPlants:HORVU6Hr1G009670.1UniProt:M0Y541PFAM:PF04258PFscan:PS51257PANTHER:PTHR12174
PANTHER:PTHR12174:SF23InterPro:Peptidase_A22B_SPPInterPro:Preselin/SPPSMART:SM00730TMHMM:TMhelixUniParc:UPI00029554C7
SEG:seg:::::
Description
No Description!
Coordinates
chrchr6H:+:17167823..17172683
Molecular Weight (calculated)
37625.4 Da
IEP (calculated)
8.747
GRAVY (calculated)
0.551
Length
342 amino acids
Sequence
(BLAST)
001: MKTHERAANL ALAGLSLAPL VINVNPNLNV ILTACLTVYV GCYRSVKATP PSETMSKEHA MRYPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIA
101: ALCATLLPSV KRFLPEGWNN NEIVWSAPYF HSLSVEFTKS QVVASIPGFF FCVWYAMKKH WLANNVLGVA FCIQGIEMLS LGSFKTGGIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTADAAR PFSMLGLGDI VIPGIFVALA LRFDVSRGIK SRRYFYSAFL GYTAGLTVTI AVMNWFRAAQ PALLYIVPGV
301: IGFVAAHCLW NGEVKPLLEF TEAQAEEKEE GGDPDHQSKK AN
Best Arabidopsis Sequence Match ( AT2G03120.1 )
(BLAST)
001: MKNCERFANL ALAGLTLAPL VVRVNPNLNV ILTACITVYV GCFRSVKDTP PTETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIV
101: ALSATLLPAI RRFLPNPWND NLIVWRFPYF KSLEVEFTKS QVVAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRRQ PQYFTSAFIG YAVGVILTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLLAFD ESKTEEATTD ESKTSEEVNK AHDE
Arabidopsis Description
SPPSignal peptide peptidase [Source:UniProtKB/Swiss-Prot;Acc:O81062]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.