Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46118 | Canola | endoplasmic reticulum, plasma membrane | 98.1 | 98.1 |
| CDY71437 | Canola | plasma membrane | 97.29 | 97.29 |
| CDX75349 | Canola | plasma membrane | 92.95 | 92.2 |
| AT4G33410.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 92.68 | 91.94 |
| CDX68973 | Canola | endoplasmic reticulum, plasma membrane | 92.41 | 91.67 |
| KRG91538 | Soybean | endoplasmic reticulum, plasma membrane | 82.11 | 81.45 |
| VIT_16s0050g00580.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 81.57 | 81.13 |
| KRH35289 | Soybean | endoplasmic reticulum, plasma membrane | 81.57 | 80.91 |
| CDX67547 | Canola | plasma membrane | 37.67 | 79.43 |
| Solyc03g025550.2.1 | Tomato | plasma membrane | 76.69 | 75.07 |
| PGSC0003DMT400040816 | Potato | plasma membrane | 71.0 | 73.6 |
| HORVU7Hr1G059420.1 | Barley | plasma membrane | 73.98 | 73.39 |
| Zm00001d049930_P003 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 73.71 | 73.32 |
| Os10t0393100-01 | Rice | plasma membrane | 73.71 | 73.32 |
| KXG25380 | Sorghum | plasma membrane | 73.17 | 72.78 |
| TraesCS7D01G279200.2 | Wheat | plasma membrane | 73.17 | 72.58 |
| TraesCS7A01G280600.1 | Wheat | plasma membrane | 73.17 | 72.58 |
| TraesCS7B01G181000.2 | Wheat | plasma membrane | 73.17 | 72.58 |
| Zm00001d031933_P003 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 72.36 | 71.77 |
| GSMUA_Achr3P14450_001 | Banana | endoplasmic reticulum, plasma membrane | 72.09 | 71.51 |
| CDY29483 | Canola | cytosol | 23.31 | 53.09 |
| CDY03016 | Canola | extracellular, golgi, plasma membrane | 10.84 | 30.53 |
| CDX88296 | Canola | plasma membrane | 24.12 | 30.07 |
| CDY03017 | Canola | plasma membrane | 26.83 | 29.55 |
| CDY45179 | Canola | plasma membrane | 26.83 | 29.55 |
| CDY60831 | Canola | plasma membrane | 26.83 | 29.46 |
| CDY17419 | Canola | plasma membrane | 26.56 | 29.17 |
| CDY64408 | Canola | plasma membrane | 26.83 | 28.86 |
| CDY09342 | Canola | plasma membrane | 26.83 | 28.86 |
| CDY53660 | Canola | plasma membrane | 19.78 | 26.45 |
| CDY30380 | Canola | plasma membrane, plastid | 23.31 | 17.92 |
| CDY53658 | Canola | plasma membrane | 25.47 | 17.38 |
| CDY15163 | Canola | plasma membrane | 23.85 | 16.3 |
| CDX90049 | Canola | plasma membrane | 23.85 | 16.3 |
| CDX86551 | Canola | plasma membrane | 23.31 | 15.9 |
| CDY63797 | Canola | plasma membrane | 23.31 | 15.9 |
| CDY08318 | Canola | plasma membrane | 23.04 | 15.77 |
| CDY45351 | Canola | plasma membrane | 23.04 | 15.77 |
| CDY38021 | Canola | plasma membrane | 22.76 | 15.56 |
| CDY56345 | Canola | plasma membrane | 14.91 | 12.3 |
| CDY55505 | Canola | plasma membrane | 25.47 | 11.88 |
Protein Annotations
| EnsemblPlants:CDX72401 | EnsemblPlantsGene:GSBRNA2T00099894001 | GO:A0A078C5U1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | InterPro:Peptidase_A22B_SPP | InterPro:Preselin/SPP |
| PANTHER:PTHR12174 | PANTHER:PTHR12174:SF22 | PFAM:PF04258 | ProteinID:CDX72401 | ProteinID:CDX72401.1 | SMART:SM00730 |
| TMHMM:TMhelix | UniParc:UPI0004EAE958 | MapMan:18.10.1.4 | : | : | : |
Description
BnaC07g44230D
Coordinates
chrLK031796:+:1055468..1057310
Molecular Weight (calculated)
40614.5 Da
IEP (calculated)
7.894
GRAVY (calculated)
0.656
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTLMYLLEP APATLILTAV SVTFASAFRA LNYAKEMERN RDFSEASITL DTSQALMIPV MSSCSLLLMF YLFSSVSQLL TAFTAVASVC SLFFWLSPYA
101: LYVKSQLGLS DPFLSRCCSK SFTRMQGLLL VGCVMTVVAW LVSGHWVLNN LLGISICIAF VSHVRLPNIK TCAMLLVCLF VYDIFWVFFS ERFFGANVMV
201: SVATQQASNP VHTVANSLNL PGLEMITKKL ELPVKIVFPR NLLGGVVPGV SASEFMMLGL GDMAIPAMLL ALVLCFDYRK TRDVVNLCDL KSSKGHKYIW
301: YALPGYAIGL VSALAAGVLT HSPQPALLYL VPSTLGPVIF MSWRRKDLAE LWEGPAVSNP IEKSHEVEI
101: LYVKSQLGLS DPFLSRCCSK SFTRMQGLLL VGCVMTVVAW LVSGHWVLNN LLGISICIAF VSHVRLPNIK TCAMLLVCLF VYDIFWVFFS ERFFGANVMV
201: SVATQQASNP VHTVANSLNL PGLEMITKKL ELPVKIVFPR NLLGGVVPGV SASEFMMLGL GDMAIPAMLL ALVLCFDYRK TRDVVNLCDL KSSKGHKYIW
301: YALPGYAIGL VSALAAGVLT HSPQPALLYL VPSTLGPVIF MSWRRKDLAE LWEGPAVSNP IEKSHEVEI
001: METLWTLLYL LEPAPATLIV TAVTVTFASA FRALNYGKEM ERNRDFSEAS ITLDSSQALM IPVMSSCSLL LMFYLFSSVS QLLTAFTAIA SVSSLFYWLS
101: PYAVYMKTQL GLSDPFLSRC CSKSFTRIQG LLLVACAMTV VAWLISGHWV LNNLLGISIC IAFVSHVRLP NIKICAMLLV CLFVYDIFWV FFSERFFGAN
201: VMVAVATQQA SNPVHTVANS LNLPGLQLIT KKLELPVKIV FPRNLLGGVV PGVSASDFMM LGLGDMAIPA MLLALVLCFD HRKTRDVVNI FDLKSSKGHK
301: YIWYALPGYA IGLVAALAAG VLTHSPQPAL LYLVPSTLGP VIFMSWRRKD LAELWEGPAL SNPIEKSHEI EI
101: PYAVYMKTQL GLSDPFLSRC CSKSFTRIQG LLLVACAMTV VAWLISGHWV LNNLLGISIC IAFVSHVRLP NIKICAMLLV CLFVYDIFWV FFSERFFGAN
201: VMVAVATQQA SNPVHTVANS LNLPGLQLIT KKLELPVKIV FPRNLLGGVV PGVSASDFMM LGLGDMAIPA MLLALVLCFD HRKTRDVVNI FDLKSSKGHK
301: YIWYALPGYA IGLVAALAAG VLTHSPQPAL LYLVPSTLGP VIFMSWRRKD LAELWEGPAL SNPIEKSHEI EI
Arabidopsis Description
SPPL1Signal peptide peptidase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z32]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.