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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 1
  • mitochondrion 2
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:extracellular, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:extracellular
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY30380 Canola plasma membrane, plastid 70.92 66.04
Bra037737.1-P Field mustard plastid 57.05 63.28
CDY53658 Canola plasma membrane 70.47 58.23
AT2G43070.4 Thale cress plasma membrane 71.59 52.89
CDY53660 Canola plasma membrane 31.77 51.45
GSMUA_Achr8P16510_001 Banana plasma membrane 35.35 40.1
CDY55505 Canola plasma membrane 70.92 40.08
Os11t0433200-02 Rice cytosol, plasma membrane 40.72 40.0
VIT_05s0062g01250.t01 Wine grape plasma membrane 47.43 39.77
CDX86551 Canola plasma membrane 46.76 38.63
CDY63797 Canola plasma membrane 46.31 38.26
OQU81829 Sorghum plasma membrane 44.97 37.64
KRH46863 Soybean endoplasmic reticulum 44.3 37.36
KRH01823 Soybean plasma membrane 44.3 37.36
TraesCS7D01G002900.1 Wheat plasma membrane 28.19 36.95
PGSC0003DMT400031075 Potato cytosol, peroxisome, plasma membrane 24.83 36.88
Solyc09g098200.2.1 Tomato plasma membrane 21.7 36.6
KRG93116 Soybean plasma membrane 41.83 36.38
TraesCS7D01G003100.1 Wheat plasma membrane 43.4 36.26
TraesCS7A01G003000.1 Wheat plasma membrane 43.4 36.26
KRH36351 Soybean plasma membrane 42.06 36.15
TraesCS4A01G495600.2 Wheat plasma membrane 43.4 35.99
TraesCS4A01G495400.1 Wheat peroxisome, plasma membrane, vacuole 27.74 35.94
Solyc12g098670.1.1 Tomato plasma membrane 40.04 33.65
PGSC0003DMT400011660 Potato plasma membrane 40.04 33.65
HORVU7Hr1G000380.6 Barley plasma membrane 40.27 33.64
GSMUA_Achr11P... Banana plasma membrane 28.86 31.31
TraesCS7A01G003200.1 Wheat plasma membrane 33.11 30.64
CDY38021 Canola plasma membrane 36.91 30.56
CDX90049 Canola plasma membrane 36.24 30.0
CDY15163 Canola plasma membrane 36.24 30.0
CDY45351 Canola plasma membrane 34.0 28.2
CDY08318 Canola plasma membrane 33.56 27.83
CDY03016 Canola extracellular, golgi, plasma membrane 7.61 25.95
GSMUA_AchrUn_... Banana plasma membrane 24.16 25.9
Zm00001d004702_P006 Maize plasma membrane 40.04 23.43
CDY60831 Canola plasma membrane 13.2 17.56
CDY17419 Canola plasma membrane 13.2 17.56
CDY45179 Canola plasma membrane 12.75 17.01
CDY03017 Canola plasma membrane 12.75 17.01
CDY64408 Canola plasma membrane 12.75 16.62
CDY09342 Canola plasma membrane 12.75 16.62
CDX88296 Canola plasma membrane 10.51 15.88
CDX72401 Canola endoplasmic reticulum, plasma membrane 12.3 14.91
CDY71437 Canola plasma membrane 12.3 14.91
CDY46118 Canola endoplasmic reticulum, plasma membrane 12.3 14.91
CDX75349 Canola plasma membrane 12.3 14.78
CDX68973 Canola endoplasmic reticulum, plasma membrane 11.41 13.71
CDY29483 Canola cytosol 2.91 8.02
CDX67547 Canola plasma membrane 2.68 6.86
Protein Annotations
MapMan:18.10.1.4Gene3D:3.50.30.30GO:A0A078J059UniProt:A0A078J059EnsemblPlants:CDY56345ProteinID:CDY56345
ProteinID:CDY56345.1GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0005575GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00019455001InterPro:PA_domainPFAM:PF02225PFAM:PF04258PANTHER:PTHR12174PANTHER:PTHR12174:SF44
InterPro:Peptidase_A22B_SPPInterPro:Preselin/SPPSMART:SM00730SUPFAM:SSF52025TMHMM:TMhelixUniParc:UPI0004EE3D85
SEG:seg:::::
Description
BnaCnng30120DBnaCnng30120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J059]
Coordinates
chrLK033479:+:35249..37858
Molecular Weight (calculated)
49677.5 Da
IEP (calculated)
9.018
GRAVY (calculated)
0.301
Length
447 amino acids
Sequence
(BLAST)
001: MYFKNFLYSL NKNIINLNPK FLDRPLIYKK INLTTATLPS LSHSPRLLHV VVSPMLSRST ASPPPLFLRC SFRRSSPHGC SNKFQTFGAS LPSKARQSRR
101: LHASLVDPSD SCYILSSRLD GRIALSFRGN CEFTEKAKHA EAAGASALLV INDKEDIDEM GCVEKDVSLN VTIPVLMISK SSGYALYKSM VEHKSGLLLL
201: MAVGTVVVGS LWSELKDPDQ ANESYSISSK EKEILYISVT GAVFFIVTAS VFLLLLFYFM SSWLVLVLII FFCIVGMQDM HKIIMAVLLR KWRHLGRKTV
301: KLPLIGTVSW MSVAQGDRSS GESMPMLLRI PRFFDPLGGY HMIGFGDLCV PGMLICFASR YDKFKKRVVS SGYFLWLTIG YGVGLLLTCL GLYLMDGHGQ
401: PALLYIVPCT LGLAVIMGLV IGELKELWNY GIEESESHTP EDPLPVA
Best Arabidopsis Sequence Match ( AT1G05820.1 )
(BLAST)
001: MSLPPFTCRL LAAAAALYLI GLLCVGADTK DVTAPKIPGC SNEFQMVKVE NWVNGENGET FTAMTAQFGT MLPSDKDKAV KLPVALTTPL DSCSNLTSKL
101: SWSIALSVRG ECAFTVKAQV AQAGGAAALV LINDKEELDE MVCGEKDTSL NVSIPILMIT TSSGDALKKS IMQNKKVELL LYAPKSPIVD YAVVFLWLMS
201: VGTVFVASVW SHVTSPKKND EQYDELSPKK SSNVDATKGG AEEETLDISA MGAVIFVISA STFLVLLFFF MSSWFILILT IFFVIGGMQG MHNINVTLIT
301: RRCSKCGQKN LKLPLLGNTS ILSLVVLLFC FVVAILWFMN RKTSHAWAGQ DIFGICMMIN VLQVARLPNI RVATILLCCA FFYDIFWVFI SPLIFKQSVM
401: IAVARGSKDT GESIPMLLRI PRLSDPWGGY NMIGFGDILF PGLLICFIFR FDKENNKGVS NGYFPWLMFG YGLGLFLTYL GLYVMNGHGQ PALLYLVPCT
501: LGITVILGLV RKELRDLWNY GTQQPSAADV NPSPEA
Arabidopsis Description
SPPL5Signal peptide peptidase-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9MA44]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.