Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- plasma membrane 3
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g098200.2.1 | Tomato | plasma membrane | 84.05 | 95.47 |
| CDY53660 | Canola | plasma membrane | 48.84 | 53.26 |
| TraesCS7D01G002900.1 | Wheat | plasma membrane | 55.15 | 48.68 |
| GSMUA_Achr8P16510_001 | Banana | plasma membrane | 61.79 | 47.21 |
| TraesCS4A01G495400.1 | Wheat | peroxisome, plasma membrane, vacuole | 50.17 | 43.77 |
| PGSC0003DMT400011660 | Potato | plasma membrane | 71.76 | 40.6 |
| Os11t0433200-02 | Rice | cytosol, plasma membrane | 59.14 | 39.12 |
| KRG93116 | Soybean | plasma membrane | 66.11 | 38.72 |
| KRH46863 | Soybean | endoplasmic reticulum | 67.77 | 38.49 |
| KRH01823 | Soybean | plasma membrane | 67.77 | 38.49 |
| KRH36351 | Soybean | plasma membrane | 66.45 | 38.46 |
| VIT_05s0062g01250.t01 | Wine grape | plasma membrane | 66.45 | 37.52 |
| GSMUA_Achr11P... | Banana | plasma membrane | 51.16 | 37.38 |
| CDX86551 | Canola | plasma membrane | 62.46 | 34.75 |
| Bra030626.1-P | Field mustard | plasma membrane | 62.46 | 34.75 |
| CDY63797 | Canola | plasma membrane | 62.13 | 34.57 |
| AT1G05820.1 | Thale cress | plasma membrane | 61.46 | 34.51 |
| OQU81829 | Sorghum | plasma membrane | 60.13 | 33.9 |
| TraesCS7D01G003100.1 | Wheat | plasma membrane | 59.8 | 33.64 |
| TraesCS4A01G495600.2 | Wheat | plasma membrane | 60.13 | 33.58 |
| Bra037737.1-P | Field mustard | plastid | 44.85 | 33.5 |
| TraesCS7A01G003000.1 | Wheat | plasma membrane | 59.14 | 33.27 |
| Bra004741.1-P | Field mustard | plasma membrane | 58.8 | 32.72 |
| CDY53658 | Canola | plasma membrane | 58.8 | 32.72 |
| CDY30380 | Canola | plasma membrane, plastid | 50.83 | 31.88 |
| HORVU7Hr1G000380.6 | Barley | plasma membrane | 54.49 | 30.65 |
| AT2G43070.4 | Thale cress | plasma membrane | 60.47 | 30.08 |
| TraesCS7A01G003200.1 | Wheat | plasma membrane | 48.17 | 30.02 |
| PGSC0003DMT400032136 | Potato | plasma membrane | 51.16 | 28.31 |
| CDY56345 | Canola | plasma membrane | 36.88 | 24.83 |
| PGSC0003DMT400024446 | Potato | plasma membrane | 25.25 | 22.62 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 30.9 | 22.3 |
| CDY55505 | Canola | plasma membrane | 58.47 | 22.25 |
| PGSC0003DMT400058489 | Potato | plasma membrane | 24.58 | 21.89 |
| Zm00001d004702_P006 | Maize | plasma membrane | 54.82 | 21.6 |
| PGSC0003DMT400040816 | Potato | plasma membrane | 24.92 | 21.07 |
Protein Annotations
| MapMan:18.10.1.4 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 | GO:GO:0005575 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 |
| UniProt:M1AV62 | PFAM:PF04258 | EnsemblPlantsGene:PGSC0003DMG400011905 | PGSC:PGSC0003DMG400011905 | EnsemblPlants:PGSC0003DMT400031075 | PANTHER:PTHR12174 |
| PANTHER:PTHR12174:SF44 | InterPro:Peptidase_A22B_SPP | InterPro:Preselin/SPP | SMART:SM00730 | TMHMM:TMhelix | UniParc:UPI000294B449 |
Description
Minor histocompatibility antigen H13 [Source:PGSC_GENE;Acc:PGSC0003DMG400011905]
Coordinates
chr9:+:60945640..60950721
Molecular Weight (calculated)
33355.9 Da
IEP (calculated)
7.583
GRAVY (calculated)
0.782
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVKEEDDSE ILHITAWTAI GFVISASTFL VLLYFFMSTW FVWLLILLFC IGGIEGLHNC IVTLILSKFR GCGKKTLNLP LVGEVTILSL VVLTLCVGFA
101: IFWAVNRKES YSWVGQDILG IALMITVLQL AQLPNIKVAT VLLCCAFVYD IFWVFLSPAI FHDSVMISVA KGKKAGGESI PMLLRVPKLT DPYKGFDMLG
201: FGDILFPGLL ICFTYRFDEA KKKGVLNGYF LWLMIGYGIG LCITYVGLFL MNGHGQPALL YLVPCTLGTC VVLGAVRREL KDLWTNCDES KQMAEARLGS
301: A
101: IFWAVNRKES YSWVGQDILG IALMITVLQL AQLPNIKVAT VLLCCAFVYD IFWVFLSPAI FHDSVMISVA KGKKAGGESI PMLLRVPKLT DPYKGFDMLG
201: FGDILFPGLL ICFTYRFDEA KKKGVLNGYF LWLMIGYGIG LCITYVGLFL MNGHGQPALL YLVPCTLGTC VVLGAVRREL KDLWTNCDES KQMAEARLGS
301: A
001: MSLPPFTCRL LAAAAALYLI GLLCVGADTK DVTAPKIPGC SNEFQMVKVE NWVNGENGET FTAMTAQFGT MLPSDKDKAV KLPVALTTPL DSCSNLTSKL
101: SWSIALSVRG ECAFTVKAQV AQAGGAAALV LINDKEELDE MVCGEKDTSL NVSIPILMIT TSSGDALKKS IMQNKKVELL LYAPKSPIVD YAVVFLWLMS
201: VGTVFVASVW SHVTSPKKND EQYDELSPKK SSNVDATKGG AEEETLDISA MGAVIFVISA STFLVLLFFF MSSWFILILT IFFVIGGMQG MHNINVTLIT
301: RRCSKCGQKN LKLPLLGNTS ILSLVVLLFC FVVAILWFMN RKTSHAWAGQ DIFGICMMIN VLQVARLPNI RVATILLCCA FFYDIFWVFI SPLIFKQSVM
401: IAVARGSKDT GESIPMLLRI PRLSDPWGGY NMIGFGDILF PGLLICFIFR FDKENNKGVS NGYFPWLMFG YGLGLFLTYL GLYVMNGHGQ PALLYLVPCT
501: LGITVILGLV RKELRDLWNY GTQQPSAADV NPSPEA
101: SWSIALSVRG ECAFTVKAQV AQAGGAAALV LINDKEELDE MVCGEKDTSL NVSIPILMIT TSSGDALKKS IMQNKKVELL LYAPKSPIVD YAVVFLWLMS
201: VGTVFVASVW SHVTSPKKND EQYDELSPKK SSNVDATKGG AEEETLDISA MGAVIFVISA STFLVLLFFF MSSWFILILT IFFVIGGMQG MHNINVTLIT
301: RRCSKCGQKN LKLPLLGNTS ILSLVVLLFC FVVAILWFMN RKTSHAWAGQ DIFGICMMIN VLQVARLPNI RVATILLCCA FFYDIFWVFI SPLIFKQSVM
401: IAVARGSKDT GESIPMLLRI PRLSDPWGGY NMIGFGDILF PGLLICFIFR FDKENNKGVS NGYFPWLMFG YGLGLFLTYL GLYVMNGHGQ PALLYLVPCT
501: LGITVILGLV RKELRDLWNY GTQQPSAADV NPSPEA
Arabidopsis Description
SPPL5Signal peptide peptidase-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9MA44]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.