Factsheet for GSMUA_Achr8P16510_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g098200.2.1	Tomato	plasma membrane	43.65	64.91
PGSC0003DMT400031075	Potato	cytosol, peroxisome, plasma membrane	47.21	61.79
CDY53660	Canola	plasma membrane	40.36	57.61
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	12.94	56.04
GSMUA_Achr11P...	Banana	plasma membrane	57.11	54.61
VIT_05s0062g01250.t01	Wine grape	plasma membrane	68.02	50.28
KRH46863	Soybean	endoplasmic reticulum	65.48	48.68
KRH01823	Soybean	plasma membrane	65.48	48.68
KRG93116	Soybean	plasma membrane	62.94	48.25
KRH36351	Soybean	plasma membrane	63.45	48.08
Solyc12g098670.1.1	Tomato	plasma membrane	60.91	45.11
PGSC0003DMT400011660	Potato	plasma membrane	60.91	45.11
CDY53658	Canola	plasma membrane	61.17	44.55
Bra004741.1-P	Field mustard	plasma membrane	61.17	44.55
CDY30380	Canola	plasma membrane, plastid	54.06	44.38
AT1G05820.1	Thale cress	plasma membrane	59.14	43.47
CDY63797	Canola	plasma membrane	59.39	43.25
Bra030626.1-P	Field mustard	plasma membrane	59.14	43.07
CDX86551	Canola	plasma membrane	58.88	42.88
AT2G43070.4	Thale cress	plasma membrane	62.69	40.83
Bra037737.1-P	Field mustard	plastid	41.62	40.69
GSMUA_Achr4P12000_001	Banana	plasma membrane	53.3	39.55
GSMUA_AchrUn_...	Banana	plasma membrane	41.12	38.85
GSMUA_Achr10P...	Banana	plasma membrane	52.28	38.72
CDY56345	Canola	plasma membrane	40.1	35.35
GSMUA_Achr11P...	Banana	extracellular	9.9	31.71
CDY55505	Canola	plasma membrane	60.91	30.34
GSMUA_Achr1P17420_001	Banana	cytosol, plasma membrane, plastid	12.18	28.07
GSMUA_Achr3P14450_001	Banana	endoplasmic reticulum, plasma membrane	24.37	25.81
GSMUA_Achr9P20490_001	Banana	cytosol, extracellular, golgi, mitochondrion	6.6	25.74
GSMUA_Achr1P24450_001	Banana	plasma membrane	19.29	25.0
GSMUA_Achr5P08750_001	Banana	plasma membrane	21.07	24.06
GSMUA_Achr4P16430_001	Banana	extracellular, plasma membrane, vacuole	5.58	15.71
GSMUA_Achr8P16520_001	Banana	endoplasmic reticulum, extracellular	2.54	5.85

Protein Annotations

MapMan:18.10.1.4	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr8G16510_001	EnsemblPlants:GSMUA_Achr8P16510_001	EnsemblPlants:GSMUA_Achr8T16510_001	UniProt:M0TR04	PFAM:PF04258	PANTHER:PTHR12174
PANTHER:PTHR12174:SF44	InterPro:Peptidase_A22B_SPP	InterPro:Preselin/SPP	SMART:SM00730	TMHMM:TMhelix	UniParc:UPI0002967EF8

Description

Putative Signal peptide peptidase-like 2B [Source:GMGC_GENE;Acc:GSMUA_Achr8G16510_001]

Coordinates

chr8:-:14327102..14345466

Molecular Weight (calculated)

43896.2 Da

IEP (calculated)

4.875

GRAVY (calculated)

0.607

Length

394 amino acids

Sequence
(BLAST)

001: MVCTENDTSL NLTIPVVMIP KSAGDYLKDT LISGQRVEVL LYSPNRPVVD LSATFLWLMA VGTIVCASLW AEIIAGEQID DRYNQLTRKD QLNAGAENRE
101: ESEKEILEIN AKGAIIFVIA ASVFLLLLFY FMSSWFIWLL IVLFCIGGTE GMHVCSVTLI SRFCKDCGQK TVNLPIIGEV LILSVVVLPF CAAFAILWAA
201: NQHASYSWIG QDILGICLMI TVLQMVRLPN IKVASALLSC AFVYDVFWVF ISPLIFHESV MIAVARGDNS GGEAIPMLLR IPRFFDPWGG YDMIGFGDIL
301: FPGLLVAFSY RYERSKKKGI LNGYFLWLTI GYAFGLFLTY LALYLMDGHG QPALLYLVPC TLGLTIILGW LRGDLNDLWN YGKHQTSSIP AEEC

Best Arabidopsis Sequence Match ( AT2G43070.3 )
(BLAST)

001: MNHSKIGTIE TVKELLNLED KKDYNIDRPI YPRKILTATL CLFFFFFFFF SPICSVDCVM SSFDPPNHRY SALVLILLLL GFSVAAADDV SWTEDSSLES
101: PGCTNKFQMV KVLNWVDGVE GDFLTGLTAQ FGAALPSVPD QALRFPAAFV DPLDSCSHLS SRLDGHIALS IRGNCAFTEK AKHAEAAGAS ALLVINDKED
201: LDEMGCMEKD TSLNVSIPVL MISKSSGDAL NKSMVDNKNV ELLLYAPKRP AVDLTAGLLL LMAVGTVVVA SLWSELTDPD QANESYSILA KDVSSAGTRK
301: DDPEKEILDI SVTGAVFFIV TASIFLLLLF YFMSSWFVWV LTIFFCIGGM QGMHNIIMAV ILRKCRHLAR KSVKLPLLGT MSVLSLLVNI VCLAFAVFWF
401: IKRHTSYSWV GQDILGICLM ITALQVVRLP NIKVATVLLC CAFVYDIFWV FISPLIFHES VMIVVAQGDS STGESIPMLL RIPRFFDPWG GYDMIGFGDI
501: LFPGLLISFA SRYDKIKKRV ISNGYFLWLT IGYGIGLLLT YLGLYLMDGH GQPALLYIVP CTLGLAVILG LVRGELKELW NYGIEESESH TPEDPMPVA

Arabidopsis Description

SPPL3SIGNAL PEPTIDE PEPTIDASE-LIKE 3 [Source:TAIR;Acc:AT2G43070]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.