Factsheet for GSMUA_Achr8P16520_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	plasma membrane	40.35	16.55
GSMUA_Achr4P12000_001	Banana	plasma membrane	37.43	12.05
GSMUA_Achr10P...	Banana	plasma membrane	35.67	11.47
GSMUA_Achr11P...	Banana	plasma membrane	19.88	8.25
GSMUA_Achr8P16510_001	Banana	plasma membrane	5.85	2.54
GSMUA_Achr1P24450_001	Banana	plasma membrane	2.92	1.64
GSMUA_Achr11P...	Banana	extracellular	1.17	1.63
GSMUA_Achr5P08750_001	Banana	plasma membrane	2.92	1.45
GSMUA_Achr4P16430_001	Banana	extracellular, plasma membrane, vacuole	1.17	1.43
GSMUA_Achr3P14450_001	Banana	endoplasmic reticulum, plasma membrane	2.92	1.34
Os02t0823100-01	Rice	plasma membrane	0.58	0.35
GSMUA_Achr1P17420_001	Banana	cytosol, plasma membrane, plastid	0.0	0.0
GSMUA_Achr9P20490_001	Banana	cytosol, extracellular, golgi, mitochondrion	0.0	0.0
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	0.0	0.0

Protein Annotations

Gene3D:3.50.30.30	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0005575
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr8G16520_001	EnsemblPlants:GSMUA_Achr8P16520_001	EnsemblPlants:GSMUA_Achr8T16520_001	UniProt:M0TR05	InterPro:PA_domain
PFAM:PF02225	PANTHER:PTHR12174	PANTHER:PTHR12174:SF44	InterPro:Peptidase_A22B_SPP	SUPFAM:SSF52025	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000296B8F9	SEG:seg	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G16520_001]

Coordinates

chr8:-:14345506..14347540

Molecular Weight (calculated)

18498.2 Da

IEP (calculated)

7.869

GRAVY (calculated)

0.163

Length

171 amino acids

Sequence
(BLAST)

001: MASRGAFPSS PHLVLAVVLL FLAFSPHLFV VAEDEITHED DDAPRSPNCN NKFQLVKIEN WVNGTQGTSI VGLSARFGTS VPRLASDAQK NSALLTNPLN
101: CCANLTSKLT NSVALAKRGD CTFTAKAKVA QLGGAAGLLV INDNEGNKFS ILQMLYLFLP LCSYWQFFNF S

Best Arabidopsis Sequence Match ( AT2G43070.1 )
(BLAST)

001: MSSFDPPNHR YSALVLILLL LGFSVAAADD VSWTEDSSLE SPGCTNKFQM VKVLNWVDGV EGDFLTGLTA QFGAALPSVP DQALRFPAAF VDPLDSCSHL
101: SSRLDGHIAL SIRGNCAFTE KAKHAEAAGA SALLVINDKE DLDEMGCMEK DTSLNVSIPV LMISKSSGDA LNKSMVDNKN VELLLYAPKR PAVDLTAGLL
201: LLMAVGTVVV ASLWSELTDP DQANESYSIL AKDVSSAGTR KDDPEKEILD ISVTGAVFFI VTASIFLLLL FYFMSSWFVW VLTIFFCIGG MQGMHNIIMA
301: VILRKCRHLA RKSVKLPLLG TMSVLSLLVN IVCLAFAVFW FIKRHTSYSW VGQDILGICL MITALQVVRL PNIKVATVLL CCAFVYDIFW VFISPLIFHE
401: SVMIVVAQGD SSTGESIPML LRIPRFFDPW GGYDMIGFGD ILFPGLLISF ASRYDKIKKR VISNGYFLWL TIGYGIGLLL TYLGLYLMDG HGQPALLYIV
501: PCTLGLAVIL GLVRGELKEL WNYGIEESES HTPEDPMPVA

Arabidopsis Description

SPPL3SIGNAL PEPTIDE PEPTIDASE-LIKE 3 [Source:TAIR;Acc:AT2G43070]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.