Factsheet for GSMUA_Achr11P15200_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	39.84	53.85
GSMUA_Achr9P20490_001	Banana	cytosol, extracellular, golgi, mitochondrion	18.7	22.77
GSMUA_Achr1P17420_001	Banana	cytosol, plasma membrane, plastid	17.89	12.87
GSMUA_Achr8P16510_001	Banana	plasma membrane	31.71	9.9
GSMUA_Achr4P12000_001	Banana	plasma membrane	30.89	7.16
GSMUA_Achr10P...	Banana	plasma membrane	29.27	6.77
GSMUA_Achr1P24450_001	Banana	plasma membrane	16.26	6.58
GSMUA_Achr5P08750_001	Banana	plasma membrane	17.89	6.38
GSMUA_Achr3P14450_001	Banana	endoplasmic reticulum, plasma membrane	18.7	6.18
VIT_03s0097g00390.t01	Wine grape	mitochondrion	3.25	1.82
GSMUA_Achr11P...	Banana	plasma membrane	5.69	1.7
GSMUA_Achr8P16520_001	Banana	endoplasmic reticulum, extracellular	1.63	1.17
GSMUA_AchrUn_...	Banana	plasma membrane	3.25	0.96
GSMUA_Achr4P16430_001	Banana	extracellular, plasma membrane, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr11P15200_001	EnsemblPlants:GSMUA_Achr11T15200_001	EnsemblPlantsGene:GSMUA_Achr11G15200_001	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019538	InterPro:Peptidase_A22B_SPP	PANTHER:PTHR12174	PANTHER:PTHR12174:SF44	PFAM:PF04258
TMHMM:TMhelix	UniParc:UPI00029625D7	UniProt:M0RSF0	MapMan:18.10.1.4	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G15200_001]

Coordinates

chr11:+:16787524..16790574

Molecular Weight (calculated)

13787.6 Da

IEP (calculated)

9.615

GRAVY (calculated)

-0.241

Length

123 amino acids

Sequence
(BLAST)

001: MCKLDSWHSA GLSLTYLVFF LMNGHGQPAL LYLVPCTLGL TVVLGGIRGE LSNLWNYGEK QSEVSPAGQL RAWVQDSRRK LLRGFGNHMI EITRNEGFDV
101: YLKTATGRTN RKTDNAFCPR SHS

Best Arabidopsis Sequence Match ( AT1G05820.4 )
(BLAST)

001: MVCGEKDTSL NVSIPILMIT TSSGDALKKS IMQNKKVELL LYAPKSPIVD YAVVFLWLMS VGTVFVASVW SHVTSPKKND EQYDELSPKK SSNVDATKGG
101: AEEETLDISA MGAVIFVISA STFLVLLFFF MSSWFILILT IFFVIGGMQG MHNINVTLIT RRCSKCGQKN LKLPLLGNTS ILSLVVLLFC FVVAILWFMN
201: RKTSHAWAGQ DIFGICMMIN VLQVARLPNI RVATILLCCA FFYDIFWVFI SPLIFKQSVM IAVARGSKDT GESIPMLLRI PRLSDPWGGY NMIGFGDILF
301: PGLLICFIFR FDKENNKGVS NGYFPWLMFG YGLGLFLTYL GLYVMNGHGQ PALLYLVPCT LGITVILGLV RKELRDLWNY GTQQPSAADV NPSPEA

Arabidopsis Description

SPPL5Signal peptide peptidase-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9MA44]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.