Factsheet for VIT_03s0097g00390.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0062g01250.t01	Wine grape	plasma membrane	52.73	21.76
VIT_15s0046g02460.t01	Wine grape	plasma membrane	28.64	11.8
VIT_02s0025g03400.t01	Wine grape	plasma membrane	25.91	10.4
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	3.18	7.69
VIT_02s0012g02640.t01	Wine grape	golgi, plasma membrane, plastid	4.55	6.67
VIT_06s0009g03520.t01	Wine grape	plasma membrane	6.36	4.11
VIT_16s0050g00580.t01	Wine grape	endoplasmic reticulum, plasma membrane	6.82	4.04
GSMUA_Achr11P...	Banana	extracellular	1.82	3.25

Protein Annotations

MapMan:18.10.1.4	Gene3D:3.50.30.30	ProteinID:CBI35429	ProteinID:CBI35429.3	UniProt:D7TY54	EMBL:FN596261
GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005764	GO:GO:0005765	GO:GO:0005773	GO:GO:0005783	GO:GO:0005794
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019538	GO:GO:0030660	GO:GO:0071458	GO:GO:0071556	PANTHER:PTHR12174	PANTHER:PTHR12174:SF44
InterPro:Peptidase_A22B_SPP	TMHMM:TMhelix	UniParc:UPI0001BE45D0	ArrayExpress:VIT_03s0097g00390	EnsemblPlantsGene:VIT_03s0097g00390	EnsemblPlants:VIT_03s0097g00390.t01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:10534310..10544446

Molecular Weight (calculated)

24641.6 Da

IEP (calculated)

9.296

GRAVY (calculated)

0.371

Length

220 amino acids

Sequence
(BLAST)

001: MFLAFWWSSR GQARDHLRQP AVFSNPLNCC SESSSELWAS IALSTRGDCS LMAKAKVAES GDAAALLVIN DKEDIYKMVC SENVTIVNIT IPVVLIPKLG
101: GVTLNKCIAD GKKGESLSIN YKGLVVICIV NMVMPPREAL HTLARQRVVQ RPLKNVRIVA GIPSPCVVHF GQKYPSILIL DVFHDNFLMK FISKVVKEVR
201: NLFFFPIIYV CIFYLFKINY

Best Arabidopsis Sequence Match ( AT2G43070.2 )
(BLAST)

001: MSSFDPPNHR YSALVLILLL LGFSVAAADD VSWTEDSSLE SPGCTNKFQM VKVLNWVDGV EGDFLTGLTA QFGAALPSVP DQALRFPAAF VDPLDSCSHL
101: SSRLDGHIAL SIRGNCAFTE KAKHAEAAGA SALLVINDKE DLDEMGCMEK DTSLNVSIPV LMISKSSGDA LNKSMVDNKN VELLLYAPKR PAVDLTAGLL
201: LLMAVGTVVV ASLWSELTDP DQANESYSIL AKVYQRIVDV SSAGTRKDDP EKEILDISVT GAVFFIVTAS IFLLLLFYFM SSWFVWVLTI FFCIGGMQGM
301: HNIIMAVILR KCRHLARKSV KLPLLGTMSV LSLLVNIVCL AFAVFWFIKR HTSYSWVGQD ILGICLMITA LQVVRLPNIK VATVLLCCAF VYDIFWVFIS
401: PLIFHESVMI VVAQGDSSTG ESIPMLLRIP RFFDPWGGYD MIGFGDILFP GLLISFASRY DKIKKRVISN GYFLWLTIGY GIGLLLTYLG LYLMDGHGQP
501: ALLYIVPCTL GLAVILGLVR GELKELWNYG IEESESHTPE DPMPVA

Arabidopsis Description

SPPL3SIGNAL PEPTIDE PEPTIDASE-LIKE 3 [Source:TAIR;Acc:AT2G43070]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.