Factsheet for VIT_05s0062g01250.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	golgi, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P16510_001	Banana	plasma membrane	50.28	68.02
Solyc09g098200.2.1	Tomato	plasma membrane	33.4	67.17
PGSC0003DMT400031075	Potato	cytosol, peroxisome, plasma membrane	37.52	66.45
KRH01823	Soybean	plasma membrane	65.1	65.47
KRH46863	Soybean	endoplasmic reticulum	64.92	65.28
KRG93116	Soybean	plasma membrane	61.91	64.2
Os11t0433200-02	Rice	cytosol, plasma membrane	54.22	63.52
KRH36351	Soybean	plasma membrane	61.73	63.27
OQU81829	Sorghum	plasma membrane	61.35	61.24
CDX86551	Canola	plasma membrane	60.98	60.07
TraesCS7A01G003000.1	Wheat	plasma membrane	60.23	60.0
Bra030626.1-P	Field mustard	plasma membrane	60.79	59.89
CDY63797	Canola	plasma membrane	60.79	59.89
TraesCS7D01G003100.1	Wheat	plasma membrane	60.04	59.81
Solyc12g098670.1.1	Tomato	plasma membrane	59.47	59.59
PGSC0003DMT400011660	Potato	plasma membrane	59.47	59.59
CDY53658	Canola	plasma membrane	60.41	59.52
Bra004741.1-P	Field mustard	plasma membrane	60.41	59.52
CDY53660	Canola	plasma membrane	30.77	59.42
AT1G05820.1	Thale cress	plasma membrane	59.47	59.14
TraesCS4A01G495600.2	Wheat	plasma membrane	59.47	58.81
TraesCS7D01G002900.1	Wheat	plasma membrane	37.52	58.65
GSMUA_Achr11P...	Banana	plasma membrane	44.65	57.77
HORVU7Hr1G000380.6	Barley	plasma membrane	57.79	57.57
TraesCS4A01G495400.1	Wheat	peroxisome, plasma membrane, vacuole	36.59	56.52
AT2G43070.4	Thale cress	plasma membrane	61.54	54.21
GSMUA_AchrUn_...	Banana	plasma membrane	41.84	53.48
CDY30380	Canola	plasma membrane, plastid	48.03	53.33
VIT_03s0097g00390.t01	Wine grape	mitochondrion	21.76	52.73
TraesCS7A01G003200.1	Wheat	plasma membrane	44.84	49.48
Bra037737.1-P	Field mustard	plastid	37.15	49.13
VIT_15s0046g02460.t01	Wine grape	plasma membrane	48.97	48.88
CDY56345	Canola	plasma membrane	39.77	47.43
VIT_02s0025g03400.t01	Wine grape	plasma membrane	47.84	46.53
VIT_02s0012g02640.t01	Wine grape	golgi, plasma membrane, plastid	11.82	42.0
CDY55505	Canola	plasma membrane	60.41	40.71
Zm00001d004702_P006	Maize	plasma membrane	57.97	40.45
VIT_16s0050g00580.t01	Wine grape	endoplasmic reticulum, plasma membrane	16.89	24.26
VIT_06s0009g03520.t01	Wine grape	plasma membrane	15.01	23.46

Protein Annotations

EntrezGene:100249763	wikigene:100249763	MapMan:18.10.1.4	Gene3D:3.50.30.30	MEROPS:A22.A04	ProteinID:CBI39454
ProteinID:CBI39454.3	UniProt:D7U9P0	EMBL:FN596745	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005764	GO:GO:0005765
GO:GO:0005773	GO:GO:0005783	GO:GO:0005794	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	GO:GO:0030660	GO:GO:0071458
GO:GO:0071556	EntrezGene:LOC100249763	wikigene:LOC100249763	InterPro:PA_domain	PFAM:PF02225	PFAM:PF04258
PANTHER:PTHR12174	PANTHER:PTHR12174:SF44	InterPro:Peptidase_A22B_SPP	InterPro:Preselin/SPP	SMART:SM00730	SUPFAM:SSF52025
SignalP:SignalP-noTM	TIGR:TC65030	TMHMM:TMhelix	UniParc:UPI00015CC220	ArrayExpress:VIT_05s0062g01250	EnsemblPlantsGene:VIT_05s0062g01250
EnsemblPlants:VIT_05s0062g01250.t01	unigene:Vvi.9558	RefSeq:XP_002268575	RefSeq:XP_002268575.1	SEG:seg	:

Description

No Description!

Coordinates

chr5:+:20039023..20071500

Molecular Weight (calculated)

57857.1 Da

IEP (calculated)

5.286

GRAVY (calculated)

0.502

Length

533 amino acids

Sequence
(BLAST)

001: MASLRLLAIP LLFLLVALPL AAADDASDQD DSGPKSPFCN NTFQLVKVKN WVDGKEHESL VGLTARFGAS LPTEAHDHLR LPAVFSNPMN CCSDSSSELS
101: GSIALSTRGD CSFMAKAKVA QSGDAAALLV INDKEDIYKM VCSENDTIVN ITIPVVMIPK SGGDTLSKSI ADGKKVELLL YAPTRPVVDS AVVFLWMMAV
201: GTVVCASLWS EYIACEQNDE RYNELSPKAS EAGATKDDPE KEVLDISAKG AVGFVITAST FLVLLYFFMS SWFVWVLIVL FCIGGVEGMH ACIVTLILRG
301: CKNSERKTVN LPLFGEVTVL SLGVLLFCLS FAIAWAITRK ASFSWIGQDV LGISLMITVL QIARLPNIKV ASVLLCCAFV YDIFWVFISP VIFKDSVMIA
401: VARGDNSGGE SIPMLLRVPR FFDPWGGYDM IGFGDILFPG LLISFAFRFD KTNKRGMTNG YFLWLAIGYG CGLLFTYLGL YLMNGHGQPA LLYLVPCTLG
501: VTIILGLMRG ELGHLWEHGT SVPIPILGRP GEA

Best Arabidopsis Sequence Match ( AT2G43070.1 )
(BLAST)

001: MSSFDPPNHR YSALVLILLL LGFSVAAADD VSWTEDSSLE SPGCTNKFQM VKVLNWVDGV EGDFLTGLTA QFGAALPSVP DQALRFPAAF VDPLDSCSHL
101: SSRLDGHIAL SIRGNCAFTE KAKHAEAAGA SALLVINDKE DLDEMGCMEK DTSLNVSIPV LMISKSSGDA LNKSMVDNKN VELLLYAPKR PAVDLTAGLL
201: LLMAVGTVVV ASLWSELTDP DQANESYSIL AKDVSSAGTR KDDPEKEILD ISVTGAVFFI VTASIFLLLL FYFMSSWFVW VLTIFFCIGG MQGMHNIIMA
301: VILRKCRHLA RKSVKLPLLG TMSVLSLLVN IVCLAFAVFW FIKRHTSYSW VGQDILGICL MITALQVVRL PNIKVATVLL CCAFVYDIFW VFISPLIFHE
401: SVMIVVAQGD SSTGESIPML LRIPRFFDPW GGYDMIGFGD ILFPGLLISF ASRYDKIKKR VISNGYFLWL TIGYGIGLLL TYLGLYLMDG HGQPALLYIV
501: PCTLGLAVIL GLVRGELKEL WNYGIEESES HTPEDPMPVA

Arabidopsis Description

SPPL3SIGNAL PEPTIDE PEPTIDASE-LIKE 3 [Source:TAIR;Acc:AT2G43070]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.