Factsheet for TraesCS4A01G495400.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, plasma membrane

Predictor Summary:

peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plasma membrane, vacuole
Any Predictor:	peroxisome, secretory
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G002900.1	Wheat	plasma membrane	73.91	74.78
TraesCS7A01G003200.1	Wheat	plasma membrane	82.03	58.59
Os11t0433200-02	Rice	cytosol, plasma membrane	71.01	53.85
Solyc09g098200.2.1	Tomato	plasma membrane	41.16	53.58
PGSC0003DMT400031075	Potato	cytosol, peroxisome, plasma membrane	43.77	50.17
TraesCS7A01G003000.1	Wheat	plasma membrane	74.78	48.22
TraesCS4A01G495600.2	Wheat	plasma membrane	74.78	47.87
CDY53660	Canola	plasma membrane	37.1	46.38
HORVU7Hr1G000380.6	Barley	plasma membrane	71.3	45.98
OQU81829	Sorghum	plasma membrane	67.25	43.45
GSMUA_Achr11P...	Banana	plasma membrane	49.28	41.26
VIT_05s0062g01250.t01	Wine grape	plasma membrane	56.52	36.59
KRH01823	Soybean	plasma membrane	55.36	36.04
KRH46863	Soybean	endoplasmic reticulum	55.36	36.04
KRG93116	Soybean	plasma membrane	51.59	34.63
KRH36351	Soybean	plasma membrane	51.59	34.23
Bra004741.1-P	Field mustard	plasma membrane	53.04	33.83
CDY53658	Canola	plasma membrane	52.75	33.64
CDY30380	Canola	plasma membrane, plastid	46.38	33.33
PGSC0003DMT400011660	Potato	plasma membrane	50.72	32.89
Solyc12g098670.1.1	Tomato	plasma membrane	50.43	32.71
AT1G05820.1	Thale cress	plasma membrane	49.28	31.72
CDX86551	Canola	plasma membrane	48.41	30.87
Bra030626.1-P	Field mustard	plasma membrane	48.12	30.68
CDY63797	Canola	plasma membrane	47.83	30.5
AT2G43070.4	Thale cress	plasma membrane	53.33	30.41
Bra037737.1-P	Field mustard	plastid	35.36	30.27
Zm00001d004702_P006	Maize	plasma membrane	63.48	28.66
TraesCS6A01G406000.1	Wheat	plasma membrane	44.93	28.39
CDY56345	Canola	plasma membrane	35.94	27.74
GSMUA_AchrUn_...	Banana	plasma membrane	32.17	26.62
TraesCS3A01G420400.2	Wheat	plasma membrane	42.32	26.45
TraesCS7A01G568900.1	Wheat	plasma membrane	43.19	26.37
TraesCS7A01G280600.1	Wheat	plasma membrane	25.22	23.39
CDY55505	Canola	plasma membrane	52.75	23.01
TraesCS6A01G048100.2	Wheat	plasma membrane	20.0	20.18

Protein Annotations

EnsemblPlants:TraesCS4A01G495400.1	EnsemblPlantsGene:TraesCS4A01G495400	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	InterPro:Peptidase_A22B_SPP	InterPro:Preselin/SPP	PANTHER:PTHR12174
PANTHER:PTHR12174:SF44	PFAM:PF04258	SMART:SM00730	TMHMM:TMhelix	MapMan:18.10.1.4	:

Description

No Description!

Coordinates

chr4A:+:742454209..742459028

Molecular Weight (calculated)

38462.7 Da

IEP (calculated)

7.611

GRAVY (calculated)

0.630

Length

345 amino acids

Sequence
(BLAST)

001: MVCSASDPSI NEPSRPVVDP SLCFLFIMAV GTIVCSSLWG EFVACQPIDE RYNQLTWQQG PNSGTNDRQD KQIIEITAKR ASFQIVGCSV LLLLFYFMSS
101: WVAWLLIVLF CIGGIQGMHV CLVTIISRIY KDWRNKTVQL PLYGEVLTLS LGVAPFCTVF VILWAAYRHS SFAWIGQDIL GICWMINIIQ KEHLPNIRVA
201: SVLLGASFVY DIFWVFISPL IFHESVMFAV ASGGSSGEVI PMLLRIPRFF DPLGGYAMLG FGDIISPGQL IAFSYRFDRA AKKGIMNGYF LWLTVGYVVG
301: LFLACLGIFL MDGHGQPAMM YLVPCTLGKH INCSFASTWP MAHLK

Best Arabidopsis Sequence Match ( AT1G05820.4 )
(BLAST)

001: MVCGEKDTSL NVSIPILMIT TSSGDALKKS IMQNKKVELL LYAPKSPIVD YAVVFLWLMS VGTVFVASVW SHVTSPKKND EQYDELSPKK SSNVDATKGG
101: AEEETLDISA MGAVIFVISA STFLVLLFFF MSSWFILILT IFFVIGGMQG MHNINVTLIT RRCSKCGQKN LKLPLLGNTS ILSLVVLLFC FVVAILWFMN
201: RKTSHAWAGQ DIFGICMMIN VLQVARLPNI RVATILLCCA FFYDIFWVFI SPLIFKQSVM IAVARGSKDT GESIPMLLRI PRLSDPWGGY NMIGFGDILF
301: PGLLICFIFR FDKENNKGVS NGYFPWLMFG YGLGLFLTYL GLYVMNGHGQ PALLYLVPCT LGITVILGLV RKELRDLWNY GTQQPSAADV NPSPEA

Arabidopsis Description

SPPL5Signal peptide peptidase-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9MA44]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.