Factsheet for TraesCS4A01G495600.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G003100.1	Wheat	plasma membrane	96.1	96.82
TraesCS7A01G003000.1	Wheat	plasma membrane	95.55	96.26
HORVU7Hr1G000380.6	Barley	plasma membrane	85.71	86.36
Os11t0433200-02	Rice	cytosol, plasma membrane	68.65	81.32
OQU81829	Sorghum	plasma membrane	76.99	77.72
TraesCS4A01G495400.1	Wheat	peroxisome, plasma membrane, vacuole	47.87	74.78
TraesCS7A01G003200.1	Wheat	plasma membrane	63.45	70.81
Solyc09g098200.2.1	Tomato	plasma membrane	30.8	62.64
PGSC0003DMT400031075	Potato	cytosol, peroxisome, plasma membrane	33.58	60.13
VIT_05s0062g01250.t01	Wine grape	plasma membrane	58.81	59.47
KRH46863	Soybean	endoplasmic reticulum	56.59	57.55
GSMUA_Achr11P...	Banana	plasma membrane	43.97	57.52
CDY53660	Canola	plasma membrane	29.31	57.25
KRH01823	Soybean	plasma membrane	56.03	56.98
KRG93116	Soybean	plasma membrane	52.69	55.25
KRH36351	Soybean	plasma membrane	52.69	54.62
Solyc12g098670.1.1	Tomato	plasma membrane	53.8	54.51
PGSC0003DMT400011660	Potato	plasma membrane	53.8	54.51
CDY53658	Canola	plasma membrane	54.36	54.16
Bra004741.1-P	Field mustard	plasma membrane	54.17	53.97
AT1G05820.1	Thale cress	plasma membrane	53.25	53.54
CDX86551	Canola	plasma membrane	52.88	52.68
CDY63797	Canola	plasma membrane	52.69	52.5
Bra030626.1-P	Field mustard	plasma membrane	52.69	52.5
GSMUA_AchrUn_...	Banana	plasma membrane	40.07	51.8
CDY30380	Canola	plasma membrane, plastid	44.71	50.21
Zm00001d004702_P006	Maize	plasma membrane	71.06	50.13
AT2G43070.4	Thale cress	plasma membrane	54.55	48.59
TraesCS6A01G406000.1	Wheat	plasma membrane	47.87	47.25
Bra037737.1-P	Field mustard	plastid	34.51	46.15
TraesCS7A01G568900.1	Wheat	plasma membrane	48.24	46.02
TraesCS3A01G420400.2	Wheat	plasma membrane	46.38	45.29
CDY56345	Canola	plasma membrane	35.99	43.4
CDY55505	Canola	plasma membrane	53.99	36.79
TraesCS7A01G280600.1	Wheat	plasma membrane	18.37	26.61
TraesCS6A01G048100.2	Wheat	plasma membrane	15.03	23.68

Protein Annotations

EnsemblPlants:TraesCS4A01G495600.2	EnsemblPlantsGene:TraesCS4A01G495600	Gene3D:3.50.30.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	InterPro:PA_domain	InterPro:Peptidase_A22B_SPP
InterPro:Preselin/SPP	PANTHER:PTHR12174	PANTHER:PTHR12174:SF58	PFAM:PF02225	PFAM:PF04258	SEG:seg
SignalP:SignalP-noTM	SMART:SM00730	SUPFAM:SSF52025	TMHMM:TMhelix	MapMan:18.10.1.4	:

Description

No Description!

Coordinates

chr4A:-:742554618..742559458

Molecular Weight (calculated)

58645.8 Da

IEP (calculated)

6.281

GRAVY (calculated)

0.497

Length

539 amino acids

Sequence
(BLAST)

001: MATPRRRELP LPALAAFLLL LLLLAGRAAA DDASSDDRGH DASPGCNNKF QLVKVKNWVN GTQGTTVIGL SARFGSPLPR TVDEAHRTFA ALTSPPDLCS
101: NSTSKLTNSI ALAARGGCPF TAKAEFAQAA GAAGLVILND DEELYKMVCG DNDTSLNVTI PVVMVPHSAG KNLKDLLDHG ARVEMQLYSP NRPVVDLSAC
201: FLWLMAVGTI VCASLWSEFV ACEQIDEHYN QLTRQPGPNS GTNNTQDKEI LEITAKGAGV FVIVASVFLL LLFYFMSSWV AWLLIVLFCI GGVEGMHVCL
301: VTIISRIFKG WGNNTVQLPF YGEVLALSVG IVPSCTVFAI LWAVYRHSSF AWIGQDILGI CLMITVLQMA HLPNIRVASA LLSAAFVYDI FWVFISPLIF
401: HESVMIAVAS GDSSGEAIPM LLRIPRFFDP WGGYDMIGFG DIIFPGLLVA FSYRFDRAGK KGILNGYFLW LTVGYAVGLF LTYLALFLMD GHGQPALLYL
501: VPCTLGVIVV LGWIRGELPH LWNYGRRPEN SVGEVSIVI

Best Arabidopsis Sequence Match ( AT2G43070.3 )
(BLAST)

001: MNHSKIGTIE TVKELLNLED KKDYNIDRPI YPRKILTATL CLFFFFFFFF SPICSVDCVM SSFDPPNHRY SALVLILLLL GFSVAAADDV SWTEDSSLES
101: PGCTNKFQMV KVLNWVDGVE GDFLTGLTAQ FGAALPSVPD QALRFPAAFV DPLDSCSHLS SRLDGHIALS IRGNCAFTEK AKHAEAAGAS ALLVINDKED
201: LDEMGCMEKD TSLNVSIPVL MISKSSGDAL NKSMVDNKNV ELLLYAPKRP AVDLTAGLLL LMAVGTVVVA SLWSELTDPD QANESYSILA KDVSSAGTRK
301: DDPEKEILDI SVTGAVFFIV TASIFLLLLF YFMSSWFVWV LTIFFCIGGM QGMHNIIMAV ILRKCRHLAR KSVKLPLLGT MSVLSLLVNI VCLAFAVFWF
401: IKRHTSYSWV GQDILGICLM ITALQVVRLP NIKVATVLLC CAFVYDIFWV FISPLIFHES VMIVVAQGDS STGESIPMLL RIPRFFDPWG GYDMIGFGDI
501: LFPGLLISFA SRYDKIKKRV ISNGYFLWLT IGYGIGLLLT YLGLYLMDGH GQPALLYIVP CTLGLAVILG LVRGELKELW NYGIEESESH TPEDPMPVA

Arabidopsis Description

SPPL3SIGNAL PEPTIDE PEPTIDASE-LIKE 3 [Source:TAIR;Acc:AT2G43070]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.