Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75349 | Canola | plasma membrane | 95.7 | 95.7 |
| AT4G33410.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 93.01 | 93.01 |
| CDY71437 | Canola | plasma membrane | 92.2 | 92.95 |
| CDY46118 | Canola | endoplasmic reticulum, plasma membrane | 91.94 | 92.68 |
| CDX72401 | Canola | endoplasmic reticulum, plasma membrane | 91.67 | 92.41 |
| CDX67547 | Canola | plasma membrane | 38.71 | 82.29 |
| VIT_16s0050g00580.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 81.72 | 81.94 |
| KRG91538 | Soybean | endoplasmic reticulum, plasma membrane | 81.72 | 81.72 |
| KRH35289 | Soybean | endoplasmic reticulum, plasma membrane | 80.65 | 80.65 |
| Solyc03g025550.2.1 | Tomato | plasma membrane | 76.34 | 75.33 |
| PGSC0003DMT400040816 | Potato | plasma membrane | 70.7 | 73.88 |
| HORVU7Hr1G059420.1 | Barley | plasma membrane | 73.39 | 73.39 |
| Zm00001d049930_P003 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 72.58 | 72.78 |
| TraesCS7A01G280600.1 | Wheat | plasma membrane | 72.58 | 72.58 |
| TraesCS7D01G279200.2 | Wheat | plasma membrane | 72.58 | 72.58 |
| TraesCS7B01G181000.2 | Wheat | plasma membrane | 72.58 | 72.58 |
| KXG25380 | Sorghum | plasma membrane | 72.04 | 72.24 |
| GSMUA_Achr3P14450_001 | Banana | endoplasmic reticulum, plasma membrane | 72.04 | 72.04 |
| Os10t0393100-01 | Rice | plasma membrane | 71.77 | 71.97 |
| Zm00001d031933_P003 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 71.24 | 71.24 |
| CDY29483 | Canola | cytosol | 22.85 | 52.47 |
| CDY03016 | Canola | extracellular, golgi, plasma membrane | 10.48 | 29.77 |
| CDX88296 | Canola | plasma membrane | 22.85 | 28.72 |
| CDY45179 | Canola | plasma membrane | 25.27 | 28.06 |
| CDY03017 | Canola | plasma membrane | 25.27 | 28.06 |
| CDY60831 | Canola | plasma membrane | 25.27 | 27.98 |
| CDY17419 | Canola | plasma membrane | 25.0 | 27.68 |
| CDY64408 | Canola | plasma membrane | 25.27 | 27.41 |
| CDY09342 | Canola | plasma membrane | 25.27 | 27.41 |
| CDY53660 | Canola | plasma membrane | 18.82 | 25.36 |
| CDY30380 | Canola | plasma membrane, plastid | 22.04 | 17.08 |
| CDY53658 | Canola | plasma membrane | 24.46 | 16.82 |
| CDY45351 | Canola | plasma membrane | 23.66 | 16.33 |
| CDY15163 | Canola | plasma membrane | 23.66 | 16.3 |
| CDX90049 | Canola | plasma membrane | 23.66 | 16.3 |
| CDY08318 | Canola | plasma membrane | 23.39 | 16.14 |
| CDY63797 | Canola | plasma membrane | 23.39 | 16.08 |
| CDX86551 | Canola | plasma membrane | 23.39 | 16.08 |
| CDY38021 | Canola | plasma membrane | 23.12 | 15.93 |
| CDY55505 | Canola | plasma membrane | 24.46 | 11.5 |
| CDY56345 | Canola | plasma membrane | 13.71 | 11.41 |
Protein Annotations
| EnsemblPlants:CDX68973 | EnsemblPlantsGene:GSBRNA2T00130722001 | GO:A0A078C1L4 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | InterPro:Peptidase_A22B_SPP | InterPro:Preselin/SPP |
| PANTHER:PTHR12174 | PANTHER:PTHR12174:SF22 | PFAM:PF04258 | ProteinID:CDX68973 | ProteinID:CDX68973.1 | SEG:seg |
| SMART:SM00730 | TMHMM:TMhelix | UniParc:UPI0004EE3AD4 | MapMan:18.10.1.4 | : | : |
Description
BnaC01g04800D
Coordinates
chrLK031789:+:2257700..2259005
Molecular Weight (calculated)
40987.8 Da
IEP (calculated)
8.205
GRAVY (calculated)
0.690
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: METLWTLLYL LEPAPATLIL TAVTVTFASA FRALNYAKEM ERNRDFSVSS ITLDTSQALM IPVMSSCSLL LMFYLFSSVS QLLTAFTAIA SVSSLFFWLS
101: PYALYIKSQL GLSDPFLSRC CSKSFTRTQG LLLVACAVTV VAWLVSGHWV LNNLLGISIC IAFVSHVRLP NIKICAMLLL CLFVYDIFWV FFSERFFGAN
201: VMVTVATQQA SNPVHTVANS LNLPGLELIT KKLELPVKIV FPRNLLGGVV SGVSASEFMM LGLGDMAIPA MLLALILCFD HRKSRDVVNL FDLKSSKGHK
301: YIWYALPGYA IGLVSALAAG VLTHSPQPAL FYLVPSTLGP VIFVSWRRKD LAELWEGSAL SSPMEKSHEI EI
101: PYALYIKSQL GLSDPFLSRC CSKSFTRTQG LLLVACAVTV VAWLVSGHWV LNNLLGISIC IAFVSHVRLP NIKICAMLLL CLFVYDIFWV FFSERFFGAN
201: VMVTVATQQA SNPVHTVANS LNLPGLELIT KKLELPVKIV FPRNLLGGVV SGVSASEFMM LGLGDMAIPA MLLALILCFD HRKSRDVVNL FDLKSSKGHK
301: YIWYALPGYA IGLVSALAAG VLTHSPQPAL FYLVPSTLGP VIFVSWRRKD LAELWEGSAL SSPMEKSHEI EI
001: METLWTLLYL LEPAPATLIV TAVTVTFASA FRALNYGKEM ERNRDFSEAS ITLDSSQALM IPVMSSCSLL LMFYLFSSVS QLLTAFTAIA SVSSLFYWLS
101: PYAVYMKTQL GLSDPFLSRC CSKSFTRIQG LLLVACAMTV VAWLISGHWV LNNLLGISIC IAFVSHVRLP NIKICAMLLV CLFVYDIFWV FFSERFFGAN
201: VMVAVATQQA SNPVHTVANS LNLPGLQLIT KKLELPVKIV FPRNLLGGVV PGVSASDFMM LGLGDMAIPA MLLALVLCFD HRKTRDVVNI FDLKSSKGHK
301: YIWYALPGYA IGLVAALAAG VLTHSPQPAL LYLVPSTLGP VIFMSWRRKD LAELWEGPAL SNPIEKSHEI EI
101: PYAVYMKTQL GLSDPFLSRC CSKSFTRIQG LLLVACAMTV VAWLISGHWV LNNLLGISIC IAFVSHVRLP NIKICAMLLV CLFVYDIFWV FFSERFFGAN
201: VMVAVATQQA SNPVHTVANS LNLPGLQLIT KKLELPVKIV FPRNLLGGVV PGVSASDFMM LGLGDMAIPA MLLALVLCFD HRKTRDVVNI FDLKSSKGHK
301: YIWYALPGYA IGLVAALAAG VLTHSPQPAL LYLVPSTLGP VIFMSWRRKD LAELWEGPAL SNPIEKSHEI EI
Arabidopsis Description
SPPL1Signal peptide peptidase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z32]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.