CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45351	Canola	plasma membrane	98.89	98.89
Bra027793.1-P	Field mustard	plasma membrane	98.7	98.7
AT1G63690.1	Thale cress	plasma membrane	93.14	92.96
KRH77554	Soybean	extracellular, golgi	25.42	80.59
VIT_02s0025g03400.t01	Wine grape	plasma membrane	79.59	78.28
KRH27921	Soybean	plasma membrane	76.25	75.69
Solyc08g081180.2.1	Tomato	plasma membrane	75.88	75.18
GSMUA_Achr4P12000_001	Banana	plasma membrane	73.84	74.95
PGSC0003DMT400032136	Potato	plasma membrane	75.32	74.63
GSMUA_Achr10P...	Banana	plasma membrane	71.8	72.74
KRH77552	Soybean	plasma membrane	49.72	71.85
EER90450	Sorghum	plasma membrane	69.94	70.34
Zm00001d014901_P001	Maize	plasma membrane	69.2	69.59
CDY38021	Canola	plasma membrane	69.02	68.89
CDX90049	Canola	plasma membrane	68.65	68.52
Os06t0730900-01	Rice	plasma membrane	68.83	68.45
Os02t0823000-01	Rice	plasma membrane	69.2	68.44
CDY15163	Canola	plasma membrane	68.46	68.33
EES06047	Sorghum	plasma membrane	67.9	66.91
TraesCS6A01G406000.1	Wheat	plasma membrane	67.72	66.85
TraesCS6B01G451100.1	Wheat	plasma membrane	67.72	66.85
TraesCS6D01G389600.1	Wheat	plasma membrane	67.53	66.67
TraesCS7D01G543700.1	Wheat	plasma membrane	66.79	65.57
KRH54524	Soybean	plasma membrane	30.24	64.43
TraesCS7A01G568900.1	Wheat	plasma membrane	66.79	63.72
Zm00001d051873_P002	Maize	plasma membrane	64.75	63.69
TraesCS7B01G489700.3	Wheat	plasma membrane, vacuole	66.79	62.94
HORVU7Hr1G122650.3	Barley	nucleus, plasma membrane	67.35	59.41
KRH66530	Soybean	golgi, plasma membrane, plastid	20.22	55.61
TraesCS4D01G010500.1	Wheat	plasma membrane	46.94	54.06
CDY53660	Canola	plasma membrane	25.23	49.28
CDY53658	Canola	plasma membrane	44.34	44.18
CDX86551	Canola	plasma membrane	41.93	41.77
CDY63797	Canola	plasma membrane	41.74	41.59
CDY30380	Canola	plasma membrane, plastid	35.62	40.0
CDY56345	Canola	plasma membrane	27.83	33.56
CDY55505	Canola	plasma membrane	44.34	30.21
CDY03016	Canola	extracellular, golgi, plasma membrane	7.24	29.77
CDY60831	Canola	plasma membrane	15.4	24.7
CDY17419	Canola	plasma membrane	15.4	24.7
CDY45179	Canola	plasma membrane	15.03	24.18
CDY09342	Canola	plasma membrane	15.21	23.91
CDY64408	Canola	plasma membrane	15.21	23.91
CDY03017	Canola	plasma membrane	14.84	23.88
CDX75349	Canola	plasma membrane	16.33	23.66
KRH61017	Soybean	cytosol	34.14	23.62
CDX67547	Canola	plasma membrane	7.61	23.43
CDX68973	Canola	endoplasmic reticulum, plasma membrane	16.14	23.39
CDX88296	Canola	plasma membrane	12.8	23.31
CDX72401	Canola	endoplasmic reticulum, plasma membrane	15.77	23.04
CDY46118	Canola	endoplasmic reticulum, plasma membrane	15.58	22.76
CDY71437	Canola	plasma membrane	15.58	22.76
CDY29483	Canola	cytosol	2.97	9.88

Protein Annotations

MapMan:18.10.1.4	Gene3D:3.50.30.30	GO:A0A078F968	UniProt:A0A078F968	MEROPS:A22.A05	EnsemblPlants:CDY08318
ProteinID:CDY08318	ProteinID:CDY08318.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0005575
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00000008001	InterPro:PA_domain	PFAM:PF02225	PFAM:PF04258	PANTHER:PTHR12174
PANTHER:PTHR12174:SF47	InterPro:Peptidase_A22B_SPP	InterPro:Preselin/SPP	SMART:SM00730	SUPFAM:SSF52025	SignalP:SignalP-TM
TMHMM:TMhelix	UniParc:UPI0004EEE8ED	SEG:seg	:	:	:

Description

BnaC09g12780DBnaC09g12780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F968]

Coordinates

chrLK031985:+:51794..55653

Molecular Weight (calculated)

59723.5 Da

IEP (calculated)

6.117

GRAVY (calculated)

0.463

Length

539 amino acids

Sequence
(BLAST)

001: MDSLRFLRIL LVSASILLVS LLYTVTAGDI VHQDDLAPKK PGCENDFVLV KVQTWIDGTE DAEFVGVGAR FGRRIVSKEK NANQTHVVFA NPRDCCSPLK
101: TKLIGDVVIV DRGNCRFTAK ANNAEAAGAS ALLIINNQKE LYKMVCEPDE TDLDIQIPAV LLPQDAGATL EKMLINSSKV SVQLYSPRRP AVDVAEVFLW
201: LMAIGTILCA SYWSAWSARE PAIEHDKLLK DAIDEIPSTN DGGSGVVEIN TLSAICFVFL ASGFLVVLYK LMSYWFVELL VVVFCIGGVE GLQTCLVALL
301: SRWFQRAGDS YIKVPFLGSI SYLTLAVSPF CIIFAVLWAV YRERSLAWIG QDVLGIALVI TVLQIVHVPN LKVGTVLLSC AFLYDIFWVF VSKKLFHESV
401: MIVVARGDKS GEDGIPMLLK IPRMFDPWGG YSIIGFGDIL LPGLLIAFAL RYDWLANKTL RTGYFIWAMV AYGLGLLITY VALNLMDGHG QPALLYIVPF
501: TLGTMLTLAR KRDDLWILWT KGEPERACPH HVRLEQCSE

Best Arabidopsis Sequence Match ( AT1G63690.1 )
(BLAST)

001: MDSLRFLRIL LLSSSILLLS LRSTVTAGDI VHQDNLAPKK PGCENDFVLV KVQTWIDGVE NEEFVGVGAR FGKRIVSKEK NANQTHLVFA NPRDSCTPLK
101: NKLSGDVVIV ERGNCRFTAK ANNAEAAGAS ALLIINNQKE LYKMVCEPDE TDLDIQIPAV MLPQDAGASL QKMLANSSKV SAQLYSPRRP AVDVAEVFLW
201: LMAIGTILCA SYWSAWSARE AAIEHDKLLK DAIDEIPNTN DGGSGVVEIN SISAIFFVVL ASGFLVILYK LMSYWFVELL VVVFCIGGVE GLQTCLVALL
301: SRWFQRAADT YVKVPFLGPI SYLTLAVSPF CIVFAVLWAV YRVHSFAWIG QDVLGIALII TVLQIVHVPN LKVGTVLLSC AFLYDIFWVF VSKKLFHESV
401: MIVVARGDKS GEDGIPMLLK IPRMFDPWGG YSIIGFGDIL LPGLLIAFAL RYDWLANKTL RTGYFIWAMV AYGLGLLITY VALNLMDGHG QPALLYIVPF
501: TLGTMLTLAR KRDDLWILWT KGEPERACPH HVRLEQCSEK

Arabidopsis Description

SPPL2Signal peptide peptidase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W469]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.