Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89333 | Canola | nucleus | 56.85 | 56.16 |
| Bra026434.1-P | Field mustard | nucleus | 56.24 | 55.56 |
| CDX94330 | Canola | nucleus | 53.99 | 53.77 |
| AT5G56210.1 | Thale cress | nucleus | 39.88 | 38.31 |
| VIT_19s0015g01790.t01 | Wine grape | nucleus | 35.79 | 28.5 |
| KRH62532 | Soybean | endoplasmic reticulum | 30.27 | 25.3 |
| KRH56393 | Soybean | cytosol | 30.27 | 25.21 |
| Solyc07g066170.2.1 | Tomato | nucleus | 16.77 | 24.48 |
| AT3G13360.2 | Thale cress | extracellular, plasma membrane, vacuole | 25.15 | 23.75 |
| PGSC0003DMT400022426 | Potato | nucleus | 28.02 | 23.38 |
| Zm00001d020879_P001 | Maize | cytosol, golgi, nucleus, plastid | 18.2 | 22.19 |
| GSMUA_Achr4P01630_001 | Banana | cytosol, golgi, nucleus | 26.79 | 22.02 |
| PGSC0003DMT400056956 | Potato | nucleus | 26.79 | 21.91 |
| GSMUA_Achr10P... | Banana | cytosol | 22.49 | 21.83 |
| GSMUA_Achr3P04120_001 | Banana | nucleus | 25.77 | 21.21 |
| EER96942 | Sorghum | cytosol, golgi, nucleus, plastid | 23.11 | 20.85 |
| TraesCS2B01G351300.1 | Wheat | cytosol, golgi, nucleus | 12.68 | 20.81 |
| Zm00001d005997_P002 | Maize | plastid | 22.7 | 20.63 |
| HORVU5Hr1G071910.1 | Barley | nucleus | 22.9 | 20.44 |
| Os08t0497900-01 | Rice | nucleus | 19.02 | 20.13 |
| TraesCS5D01G265600.1 | Wheat | nucleus | 22.7 | 20.11 |
| Os09t0481300-01 | Rice | nucleus | 21.27 | 19.73 |
| TraesCS5A01G257000.1 | Wheat | cytosol, golgi, nucleus, plastid | 21.88 | 19.63 |
| Os04t0471300-01 | Rice | cytosol, golgi, nucleus | 12.07 | 19.54 |
| TraesCS5B01G256500.1 | Wheat | cytosol, golgi, nucleus, plastid | 21.47 | 19.23 |
| EES14314 | Sorghum | nucleus | 19.22 | 18.58 |
| TraesCS7B01G135800.1 | Wheat | cytosol, golgi, nucleus | 19.84 | 18.03 |
| TraesCS7D01G238200.1 | Wheat | cytosol | 19.63 | 17.88 |
| TraesCS7A01G240200.1 | Wheat | cytosol | 19.63 | 17.65 |
| Zm00001d003334_P001 | Maize | cytosol, nucleus, plastid | 10.84 | 17.21 |
| OQU81760 | Sorghum | nucleus | 14.93 | 17.14 |
| HORVU2Hr1G081800.3 | Barley | cytosol, nucleus | 16.16 | 17.1 |
| TraesCS2A01G331000.1 | Wheat | cytosol | 17.38 | 16.67 |
| HORVU7Hr1G048940.3 | Barley | cytosol | 19.43 | 16.64 |
| Zm00001d025667_P001 | Maize | cytosol | 16.56 | 16.6 |
| TraesCS2D01G332000.1 | Wheat | cytosol | 16.77 | 16.08 |
Protein Annotations
| MapMan:20.4.2.1.2 | EntrezGene:7922386 | ProteinID:AEE85201.1 | EMBL:AK118341 | EMBL:AK228147 | ArrayExpress:AT4G26455 |
| EnsemblPlantsGene:AT4G26455 | RefSeq:AT4G26455 | TAIR:AT4G26455 | RefSeq:AT4G26455-TAIR-G | EnsemblPlants:AT4G26455.1 | TAIR:AT4G26455.1 |
| Unigene:At.74538 | EMBL:BT003145 | ProteinID:CAA18225.1 | ProteinID:CAB79500.1 | ncoils:Coil | EMBL:EF554923 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005737 | GO:GO:0006997 | GO:GO:0008150 | GO:GO:0009504 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0031965 | GO:GO:0046982 |
| RefSeq:NP_001154269.1 | PO:PO:0000293 | PO:PO:0009005 | PANTHER:PTHR34562 | PANTHER:PTHR34562:SF1 | UniProt:Q8GXA4 |
| UniParc:UPI000000BF0E | Symbol:WIP1 | SEG:seg | : | : | : |
Description
WIP1WPP domain-interacting protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXA4]
Coordinates
chr4:+:13365283..13367531
Molecular Weight (calculated)
53904.7 Da
IEP (calculated)
4.459
GRAVY (calculated)
-0.667
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLESESSAL ESVDDNVLIQ QSASNVCDDG RSLDNGSCSD ESVKLLSTSN SVELGKPMSF DSPGDGGGAY SPVLKGQGLR KWRRIRRDLV KDTSANMENS
101: KALKRGLSGV AHSHGKQMQF QSPEVEQESQ GSVGSVNMLK SSGDGFDILG SSGYDSRFVA GVGFSAGMDL EIDDDRSSKS STVARAPKVI RYEKPMISSG
201: QGGNIRVENS KKHRGESVDF EKENSYSSLE SDSRKQSGRM MDYNGENGET SMRKDDAGGE GGESINTDNR YSDEMDPLTE AINGFLALQD ALEKEVQQFQ
301: EIGNEPMPQH HEQVSEANSP HPEIVTLVNN VEQLENMLEE TRSMLEVKES HIRDLESTTN QSKHSWGGTE IVVEDIFRQK IEAEIEYLIY SRSIDNLNSQ
401: MKLIDEQESL AEEQTHETLN KLGRVQTKAA NFTNRAQDLQ NDCIEITGTI KKRACKITSY VLIQLVLLST VVLLLLSQLL PEPDTVVPT
101: KALKRGLSGV AHSHGKQMQF QSPEVEQESQ GSVGSVNMLK SSGDGFDILG SSGYDSRFVA GVGFSAGMDL EIDDDRSSKS STVARAPKVI RYEKPMISSG
201: QGGNIRVENS KKHRGESVDF EKENSYSSLE SDSRKQSGRM MDYNGENGET SMRKDDAGGE GGESINTDNR YSDEMDPLTE AINGFLALQD ALEKEVQQFQ
301: EIGNEPMPQH HEQVSEANSP HPEIVTLVNN VEQLENMLEE TRSMLEVKES HIRDLESTTN QSKHSWGGTE IVVEDIFRQK IEAEIEYLIY SRSIDNLNSQ
401: MKLIDEQESL AEEQTHETLN KLGRVQTKAA NFTNRAQDLQ NDCIEITGTI KKRACKITSY VLIQLVLLST VVLLLLSQLL PEPDTVVPT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.