Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002835.1-P | Field mustard | cytosol, golgi, nucleus | 30.26 | 55.8 |
| CDY17403 | Canola | nucleus | 30.26 | 55.8 |
| CDY32806 | Canola | cytosol, golgi, nucleus | 30.45 | 55.56 |
| AT4G26455.1 | Thale cress | nucleus | 38.31 | 39.88 |
| VIT_19s0015g01790.t01 | Wine grape | nucleus | 38.31 | 31.76 |
| KRH56393 | Soybean | cytosol | 32.02 | 27.77 |
| KRH62532 | Soybean | endoplasmic reticulum | 31.63 | 27.52 |
| AT3G13360.2 | Thale cress | extracellular, plasma membrane, vacuole | 27.9 | 27.41 |
| Solyc07g066170.2.1 | Tomato | nucleus | 17.68 | 26.87 |
| TraesCS2B01G351300.1 | Wheat | cytosol, golgi, nucleus | 14.73 | 25.17 |
| PGSC0003DMT400056956 | Potato | nucleus | 29.47 | 25.08 |
| PGSC0003DMT400022426 | Potato | nucleus | 28.09 | 24.4 |
| Zm00001d003334_P001 | Maize | cytosol, nucleus, plastid | 13.95 | 23.05 |
| Os04t0471300-01 | Rice | cytosol, golgi, nucleus | 13.56 | 22.85 |
| Zm00001d020879_P001 | Maize | cytosol, golgi, nucleus, plastid | 17.88 | 22.69 |
| EER96942 | Sorghum | cytosol, golgi, nucleus, plastid | 23.97 | 22.51 |
| Zm00001d005997_P002 | Maize | plastid | 23.38 | 22.12 |
| OQU81760 | Sorghum | nucleus | 18.27 | 21.83 |
| GSMUA_Achr3P04120_001 | Banana | nucleus | 25.15 | 21.55 |
| GSMUA_Achr10P... | Banana | cytosol | 21.02 | 21.23 |
| GSMUA_Achr4P01630_001 | Banana | cytosol, golgi, nucleus | 24.75 | 21.18 |
| TraesCS5A01G257000.1 | Wheat | cytosol, golgi, nucleus, plastid | 22.59 | 21.1 |
| TraesCS5D01G265600.1 | Wheat | nucleus | 22.79 | 21.01 |
| Os08t0497900-01 | Rice | nucleus | 18.86 | 20.78 |
| TraesCS7D01G238200.1 | Wheat | cytosol | 21.81 | 20.67 |
| HORVU5Hr1G071910.1 | Barley | nucleus | 22.0 | 20.44 |
| HORVU2Hr1G081800.3 | Barley | cytosol, nucleus | 18.47 | 20.35 |
| TraesCS5B01G256500.1 | Wheat | cytosol, golgi, nucleus, plastid | 21.81 | 20.33 |
| TraesCS7B01G135800.1 | Wheat | cytosol, golgi, nucleus | 21.41 | 20.26 |
| EES14314 | Sorghum | nucleus | 20.04 | 20.16 |
| TraesCS7A01G240200.1 | Wheat | cytosol | 21.41 | 20.04 |
| TraesCS2A01G331000.1 | Wheat | cytosol | 19.45 | 19.41 |
| TraesCS2D01G332000.1 | Wheat | cytosol | 18.86 | 18.82 |
| Os09t0481300-01 | Rice | nucleus | 19.45 | 18.79 |
| Zm00001d025667_P001 | Maize | cytosol | 17.88 | 18.65 |
| HORVU7Hr1G048940.3 | Barley | cytosol | 20.04 | 17.86 |
Protein Annotations
| MapMan:20.4.2.1.2 | EntrezGene:835720 | UniProt:A0A178UG79 | ProteinID:AED96735.1 | ArrayExpress:AT5G56210 | EnsemblPlantsGene:AT5G56210 |
| RefSeq:AT5G56210 | TAIR:AT5G56210 | RefSeq:AT5G56210-TAIR-G | EnsemblPlants:AT5G56210.1 | TAIR:AT5G56210.1 | EMBL:AY735734 |
| EMBL:AY735735 | EMBL:AY924865 | Unigene:At.51097 | ProteinID:BAB09112.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005635 | GO:GO:0005737 | GO:GO:0006997 | GO:GO:0008150 | GO:GO:0009504 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0031965 | GO:GO:0042803 | GO:GO:0046982 |
| RefSeq:NP_200432.1 | ProteinID:OAO92773.1 | PO:PO:0000293 | PO:PO:0009005 | PANTHER:PTHR34562 | PANTHER:PTHR34562:SF1 |
| UniProt:Q9FH18 | SUPFAM:SSF57997 | UniParc:UPI00000A4575 | Symbol:WIP2 | SEG:seg | : |
Description
WIP2WPP domain-interacting protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH18]
Coordinates
chr5:-:22750462..22752817
Molecular Weight (calculated)
56516.9 Da
IEP (calculated)
4.602
GRAVY (calculated)
-0.684
Length
509 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLESESSVL ESVEDNNGLI GDLDKELNSP VETSPLISKG FGLRKWKRRL RRDLVKDDTS VSMENSKALK RVLSGLVDPN AKQMHLPGPE VRQDSVGSVG
101: SVNSVVGFVM GGESYGNGLA FAAGVDSDNS EDRSSTMSHS WDKHRGKVSG GKSVISSGDS SQQRKSSVEK SNKLRGERIK IEKENSHSSM ESADSRSSNF
201: VFMQGASYSL SSREQGGRRM MDYDDENSDH DAHTSKRKDN VEEEEEETED YSQGDCVEES QIKSNGSSDN LDPLIVAVNS FQTLQEALQK ELQKFQELGK
301: EEPITSLHDG GESSSCIHAG HEGASEASSS YRFGSEKMGE MELTSLDSEI LNLVNNVEHL EIKLEEAKRI LEVKETQIRE LESTINVSET CNGGTEIGIE
401: DIFQQKVEAE IEYIIFSRSV GNLKRRIKLI EEEKTLGLSK LDKAETKAEN LKNQAQDLQN HCVEITEIQE VECLKKRAFK TTRCLLLQLG LLFILYYSLL
501: PEPEIAVPT
101: SVNSVVGFVM GGESYGNGLA FAAGVDSDNS EDRSSTMSHS WDKHRGKVSG GKSVISSGDS SQQRKSSVEK SNKLRGERIK IEKENSHSSM ESADSRSSNF
201: VFMQGASYSL SSREQGGRRM MDYDDENSDH DAHTSKRKDN VEEEEEETED YSQGDCVEES QIKSNGSSDN LDPLIVAVNS FQTLQEALQK ELQKFQELGK
301: EEPITSLHDG GESSSCIHAG HEGASEASSS YRFGSEKMGE MELTSLDSEI LNLVNNVEHL EIKLEEAKRI LEVKETQIRE LESTINVSET CNGGTEIGIE
401: DIFQQKVEAE IEYIIFSRSV GNLKRRIKLI EEEKTLGLSK LDKAETKAEN LKNQAQDLQN HCVEITEIQE VECLKKRAFK TTRCLLLQLG LLFILYYSLL
501: PEPEIAVPT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.