Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d003334_P001 | Maize | cytosol, nucleus, plastid | 52.46 | 83.12 |
| TraesCS2B01G351300.1 | Wheat | cytosol, golgi, nucleus | 35.66 | 58.39 |
| Os04t0471300-01 | Rice | cytosol, golgi, nucleus | 35.86 | 57.95 |
| HORVU2Hr1G081800.3 | Barley | cytosol, nucleus | 49.18 | 51.95 |
| TraesCS2A01G331000.1 | Wheat | cytosol | 52.46 | 50.2 |
| TraesCS2D01G332000.1 | Wheat | cytosol | 52.25 | 50.0 |
| CDY17403 | Canola | nucleus | 13.93 | 24.64 |
| Bra002835.1-P | Field mustard | cytosol, golgi, nucleus | 13.93 | 24.64 |
| Solyc07g066170.2.1 | Tomato | nucleus | 16.8 | 24.48 |
| CDY32806 | Canola | cytosol, golgi, nucleus | 13.32 | 23.3 |
| Zm00001d020879_P001 | Maize | cytosol, golgi, nucleus, plastid | 17.62 | 21.45 |
| GSMUA_Achr10P... | Banana | cytosol | 21.31 | 20.63 |
| CDY24192 | Canola | plastid | 12.5 | 20.13 |
| Zm00001d005997_P002 | Maize | plastid | 20.9 | 18.96 |
| GSMUA_Achr4P01630_001 | Banana | cytosol, golgi, nucleus | 22.95 | 18.82 |
| AT5G56210.1 | Thale cress | nucleus | 18.65 | 17.88 |
| GSMUA_Achr3P04120_001 | Banana | nucleus | 21.72 | 17.85 |
| Bra001502.1-P | Field mustard | nucleus, plastid | 15.78 | 17.42 |
| CDX82542 | Canola | plastid | 15.78 | 17.38 |
| VIT_19s0015g01790.t01 | Wine grape | nucleus | 21.72 | 17.26 |
| CDX75706 | Canola | cytosol, golgi, nucleus | 14.75 | 17.14 |
| CDY43354 | Canola | cytosol, golgi, nucleus | 13.93 | 17.04 |
| Bra039387.1-P | Field mustard | cytosol, golgi, nucleus, plastid | 13.73 | 16.75 |
| AT4G26455.1 | Thale cress | nucleus | 16.6 | 16.56 |
| PGSC0003DMT400056956 | Potato | nucleus | 20.08 | 16.39 |
| KRH62532 | Soybean | endoplasmic reticulum | 19.26 | 16.07 |
| KRH56393 | Soybean | cytosol | 19.26 | 16.01 |
| CDX89333 | Canola | nucleus | 16.19 | 15.96 |
| CDX94330 | Canola | nucleus | 15.98 | 15.89 |
| Bra026434.1-P | Field mustard | nucleus | 15.78 | 15.56 |
| PGSC0003DMT400022426 | Potato | nucleus | 18.65 | 15.53 |
| AT3G13360.2 | Thale cress | extracellular, plasma membrane, vacuole | 16.19 | 15.25 |
Protein Annotations
| EnsemblPlants:Zm00001d025667_P001 | EnsemblPlants:Zm00001d025667_T001 | EnsemblPlantsGene:Zm00001d025667 | ncoils:Coil | PANTHER:PTHR34562 | PANTHER:PTHR34562:SF7 |
| ProteinID:AQK44215.1 | SEG:seg | UniParc:UPI000844B7C3 | UniProt:A0A1D6J8G9 | MapMan:20.4.2.1.2 | : |
Description
WPP domain-interacting protein 2
Coordinates
chr10:-:125488390..125491008
Molecular Weight (calculated)
56217.3 Da
IEP (calculated)
5.482
GRAVY (calculated)
-0.569
Length
488 amino acids
Sequence
(BLAST)
(BLAST)
001: MPKLEFTIRA ENLGQYPREP PRDSDMHWGE VPQFGDANKL ADLRLKDITI ADFDIGVRTE NPVRSPPKLP FDKKAVVVPK LALPWLGPLD KLFVETSPRK
101: LCRLRRWRRV RRQSPDNPLQ LNINYLVLAT GYSLGIIGMK TVGDCNRKRV WVKDFGFAGK GCKAQRRAVR DRRHASFAES YLIASDAGDA FSNYKHRTML
201: MHYDVDRSED RQSEEVQSAY RRDSDIGEEM IISSEEQNDE NEWSWVNQDR DGGPLAESVS SLHMTQQVLE NEIQKLSELG KELEAEESTS GNKDQDVIVL
301: PYAEVDMLKL NEKMEHLEQK VKEVSNTIRE KDLRLSKLQI LIGTADRATV EEAAASIDQL ETEFEHHLQE ILEAEIQYLV MMKARQNWQV RAEDQMALEE
401: HRASAAGDNT RMLLKLRETE SKIVMLKEQV DKLEVREKDL YRTTEVLKMQ SRTFKVSLFG LVQLIMMCLS LKMFFAQVSA PFDEVVPT
101: LCRLRRWRRV RRQSPDNPLQ LNINYLVLAT GYSLGIIGMK TVGDCNRKRV WVKDFGFAGK GCKAQRRAVR DRRHASFAES YLIASDAGDA FSNYKHRTML
201: MHYDVDRSED RQSEEVQSAY RRDSDIGEEM IISSEEQNDE NEWSWVNQDR DGGPLAESVS SLHMTQQVLE NEIQKLSELG KELEAEESTS GNKDQDVIVL
301: PYAEVDMLKL NEKMEHLEQK VKEVSNTIRE KDLRLSKLQI LIGTADRATV EEAAASIDQL ETEFEHHLQE ILEAEIQYLV MMKARQNWQV RAEDQMALEE
401: HRASAAGDNT RMLLKLRETE SKIVMLKEQV DKLEVREKDL YRTTEVLKMQ SRTFKVSLFG LVQLIMMCLS LKMFFAQVSA PFDEVVPT
001: MFFFSCVCRI ISSTLIIFVD TASPGNNVGG FLRRTLNSLG FCFSCSSVTQ ASSRWIVLGM NESVPDSVED NGNSVPANGL LVLPDNDHEE GGVGSPQRSN
101: SVESPGGSVH STRKGFGLKK WRRIKRDGPV RDEAAPVDDG SKLLKRGLAG LVNPPSKHVE FSSVEARQSS EGSVGSVNMV HHPGVANGFS PDIGCMFAVG
201: QAFEKSEEHS GNTIGGKNVV GGKVVSGSQE KLWSDTIKRA SEERGDIEKE KPCSSLDSDL RSSDFVFSTG SVSVGNHGEK DERLTMNYIG GFSNEGQVKE
301: EVQTYSRSEN GNKEDDGESK KNNNHWADKD ALADSIRSFA VLQEVLWKEV QSFQELGKES VLLHSNTDEL SSDQPSHQNC KEDNSTSSGS KALILKEKVK
401: LLEHKLEEAR AALEAKEARI QELENSKIES ELECIFQRKI ETEIEHLMLT RSLSSLQVLQ ETKKLHSLKE DPVSNRGNIL GKTCKLGFYI LTQLILLVSI
501: LRFLVLQFSP ASRLVIPT
101: SVESPGGSVH STRKGFGLKK WRRIKRDGPV RDEAAPVDDG SKLLKRGLAG LVNPPSKHVE FSSVEARQSS EGSVGSVNMV HHPGVANGFS PDIGCMFAVG
201: QAFEKSEEHS GNTIGGKNVV GGKVVSGSQE KLWSDTIKRA SEERGDIEKE KPCSSLDSDL RSSDFVFSTG SVSVGNHGEK DERLTMNYIG GFSNEGQVKE
301: EVQTYSRSEN GNKEDDGESK KNNNHWADKD ALADSIRSFA VLQEVLWKEV QSFQELGKES VLLHSNTDEL SSDQPSHQNC KEDNSTSSGS KALILKEKVK
401: LLEHKLEEAR AALEAKEARI QELENSKIES ELECIFQRKI ETEIEHLMLT RSLSSLQVLQ ETKKLHSLKE DPVSNRGNIL GKTCKLGFYI LTQLILLVSI
501: LRFLVLQFSP ASRLVIPT
Arabidopsis Description
WIP3WPP domain interacting protein 3 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSR4]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.