Factsheet for Zm00001d034691_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003334_P001
Zm00001d005997_P002
Zm00001d010047_P001
Zm00001d017768_P006
Zm00001d020667_P001
Zm00001d020879_P001
Zm00001d025667_P001
Zm00001d038964_P001
Zm00001d039272_P003
Zm00001d051562_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G63130.1	Zm00001d017768_P006	AT3G50910.1	21798944
AT3G63130.1	Zm00001d020667_P001	AT3G50910.1	21798944
AT3G63130.1	Zm00001d038964_P001	AT3G50910.1	21798944
AT3G63130.1	Zm00001d051562_P001	AT3G50910.1	21798944
AT3G63130.1	Zm00001d003334_P001	AT4G26455.1	17600715
AT3G63130.1	Zm00001d005997_P002	AT4G26455.1	17600715
AT3G63130.1	Zm00001d020879_P001	AT4G26455.1	17600715
AT3G63130.1	Zm00001d025667_P001	AT4G26455.1	17600715
AT3G63130.1	Zm00001d003334_P001	AT4G26455.1	20579133
AT3G63130.1	Zm00001d005997_P002	AT4G26455.1	20579133
AT3G63130.1	Zm00001d020879_P001	AT4G26455.1	20579133
AT3G63130.1	Zm00001d025667_P001	AT4G26455.1	20579133
AT3G63130.1	Zm00001d010047_P001	AT5G11390.1	18591351
AT3G63130.1	Zm00001d039272_P003	AT5G11390.1	18591351
AT3G63130.1	Zm00001d003334_P001	AT5G56210.1	17600715
AT3G63130.1	Zm00001d005997_P002	AT5G56210.1	17600715
AT3G63130.1	Zm00001d020879_P001	AT5G56210.1	17600715
AT3G63130.1	Zm00001d025667_P001	AT5G56210.1	17600715
AT3G63130.1	Zm00001d003334_P001	AT5G56210.1	20579133
AT3G63130.1	Zm00001d005997_P002	AT5G56210.1	20579133
AT3G63130.1	Zm00001d020879_P001	AT5G56210.1	20579133
AT3G63130.1	Zm00001d025667_P001	AT5G56210.1	20579133
AT5G19320.1	Zm00001d003334_P001	AT4G26455.1	17600715
AT5G19320.1	Zm00001d005997_P002	AT4G26455.1	17600715
AT5G19320.1	Zm00001d020879_P001	AT4G26455.1	17600715
AT5G19320.1	Zm00001d025667_P001	AT4G26455.1	17600715
AT5G19320.1	Zm00001d010047_P001	AT5G11390.1	18591351
AT5G19320.1	Zm00001d039272_P003	AT5G11390.1	18591351
AT5G19320.1	Zm00001d003334_P001	AT5G56210.1	17600715
AT5G19320.1	Zm00001d005997_P002	AT5G56210.1	17600715
AT5G19320.1	Zm00001d020879_P001	AT5G56210.1	17600715
AT5G19320.1	Zm00001d025667_P001	AT5G56210.1	17600715

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017239_P001	Maize	mitochondrion, plasma membrane	67.63	49.14
Zm00001d051112_P001	Maize	plasma membrane	64.47	47.48
CDY16082	Canola	cytosol	13.68	46.02
EES07543	Sorghum	cytosol	28.68	43.43
Os05t0543200-01	Rice	plasma membrane	60.79	42.46
TraesCS1A01G256200.1	Wheat	cytosol	60.53	41.82
TraesCS1B01G266900.1	Wheat	plastid	60.53	41.74
TraesCS1D01G255600.1	Wheat	cytosol, plastid	60.53	41.44
TraesCS3D01G394300.1	Wheat	cytosol, plastid	60.0	41.16
TraesCS3B01G433100.1	Wheat	cytosol, plastid	59.74	40.97
HORVU3Hr1G090080.1	Barley	plastid	59.47	40.79
Bra026911.1-P	Field mustard	cytosol	13.68	39.39
TraesCS3A01G400100.1	Wheat	plastid	60.0	38.71
HORVU1Hr1G063300.3	Barley	plastid	60.79	35.38
KRH32020	Soybean	cytosol	49.47	35.21
KRG91256	Soybean	endoplasmic reticulum	48.68	34.77
KRH35557	Soybean	endoplasmic reticulum, nucleus	48.68	34.71
KRH71426	Soybean	nucleus	48.42	34.52
VIT_07s0104g00520.t01	Wine grape	plastid	48.68	34.2
VIT_19s0014g03800.t01	Wine grape	cytosol, plastid	47.11	34.03
CDX93931	Canola	cytosol	30.26	34.02
GSMUA_Achr11P...	Banana	cytosol, plastid	48.42	33.58
VIT_05s0020g02970.t01	Wine grape	cytosol, plastid	47.11	33.21
PGSC0003DMT400086322	Potato	cytosol	46.58	33.15
Solyc09g065190.1.1	Tomato	plastid	46.58	33.15
CDY56462	Canola	cytosol, plastid	46.58	33.08
Bra007730.1-P	Field mustard	cytosol, plastid	46.32	32.9
AT3G63130.1	Thale cress	plastid	46.05	32.71
Solyc01g079680.2.1	Tomato	plastid	47.11	32.55
PGSC0003DMT400023310	Potato	plastid	47.11	32.37
AT5G19320.1	Thale cress	cytosol	45.53	31.74
CDX89174	Canola	plastid	44.74	31.54
Bra040432.1-P	Field mustard	plastid	44.47	31.53
CDX92540	Canola	cytosol	45.79	31.07
CDX76683	Canola	mitochondrion	46.05	29.66
Zm00001d043604_P002	Maize	cytosol	40.53	28.68
Bra020034.1-P	Field mustard	cytosol	18.42	28.46
CDY02566	Canola	cytosol	14.47	27.78
CDY44911	Canola	cytosol	17.89	27.09
Zm00001d046105_P001	Maize	peroxisome	41.32	26.7
GSMUA_Achr8P13660_001	Banana	cytosol	37.11	23.04
Os05t0409200-00	Rice	cytosol	6.32	22.43
CDY05221	Canola	cytosol, mitochondrion, nucleus, plastid	7.89	15.71
AT3G06000.1	Thale cress	cytosol	8.42	15.17
CDY27720	Canola	cytosol, mitochondrion	8.95	13.99
Bra013834.1-P	Field mustard	cytosol	4.74	13.64
Bra020788.1-P	Field mustard	cytosol, mitochondrion	8.16	13.14
Zm00001d044774_P004	Maize	plastid	17.11	10.02
Zm00001d052426_P001	Maize	cytosol	2.63	7.3
CDX93932	Canola	cytosol	1.58	5.22

Protein Annotations

MapMan:23.5.1.5	MapMan:27.5.2.4	Gene3D:3.30.810.10	Gene3D:3.80.10.10	UniProt:A0A1D6LA42	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016307	GO:GO:0016310
GO:GO:0016740	GO:GO:0046488	GO:GO:0046854	InterPro:IPR001611	InterPro:IPR002498	InterPro:IPR027483
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	ProteinID:ONM11005.1	PFAM:PF01504	PFAM:PF13516
InterPro:PInositol-4-P-5-kinase_C	InterPro:PInositol-4-P-5-kinase_core	PFscan:PS51455	PANTHER:PTHR24106	PANTHER:PTHR24106:SF248	SMART:SM00330
SMART:SM00368	SUPFAM:SSF52047	SUPFAM:SSF56104	UniParc:UPI000844B548	EnsemblPlantsGene:Zm00001d034691	EnsemblPlants:Zm00001d034691_P001
EnsemblPlants:Zm00001d034691_T001	SEG:seg	:	:	:	:

Description

RAN GTPase-activating protein 2

Coordinates

chr1:+:300086263..300087873

Molecular Weight (calculated)

42399.6 Da

IEP (calculated)

9.608

GRAVY (calculated)

-0.177

Length

380 amino acids

Sequence
(BLAST)

001: MTFQIYCCPR TTAELEAHVA DTSLVSADAP RVLADTVLDI SGGERAFIEA DEAKELLSPL TKPGNSYKRI CFSNRSFGIG AANVAGPILD SVKNQLTEVD
101: ISDFVAGRPE DEALDVMRIF SKALEGSVLR YLNISDNALG EKGRKLRKLY LSLFLQLKLK VLHFHNNMTG DEGAMYIAEM VKRSPNVESF RCSATRIGSN
201: GGVALSEALG TCTRLKKLDL RDNLFGVDAG LALSKTLPKL PDLVELYLSD LNLENKGTIA IAKALEQSAP QLEILLKMLP KYYNHVRAYD NTLITKKFGV
301: HRITLKGGRK VRFVVMGNMF CTELRIPRKY DLKGSTQGRS TKKQNINENA TLKDLDLSYV FHVDKPWRDT LFRKRLTLFI

Best Arabidopsis Sequence Match ( AT5G19320.2 )
(BLAST)

001: MADILDSRPH AFSIKLWPPS LPTRKALIER ITNNFSSKTI FTEKYGSLTK DQATENAKRI EDIAFSTANQ QFEREPDGDG GSAVQLYAKE CSKLILEVLK
101: KGPVAKVAAR ELISEDSVSP RETFFDISKG KRAFIEAEEA EELLKPLKEP GNAYTKICFS NRSFGLGAAR VAEPILASLK DQLKEVDLSD FVAGRPELEA
201: LEVMNIFSDA LQGSILSSLN LSDNALGEKG VRAFGALLKS LSSLEELYLM NDGISKEAAQ AVSELIPSTE NLRVLHFHNN MTGDEGALAI AEVVKRSPLL
301: ENFRCSSTRV GSKGGIALSE ALEHCTHMEK LDLRDNMFGT EAGVSLSKTL SSFKHMTELY LSYLNLEDEG AIAIVNALKE SASPIEVLEM AGNDITVEAA
401: SAIAACVAAK QDLNKLNLSE NELKDEGCVQ IANCIEEGHS KLQYIDMSTN YIRRAGARAL AHVVVKKEAF KLLNIDGNII SEEGIEELKE IFKKSPELLG
501: ALDENDPDGE EDDDDEEDEE DEENEGNGNG ELESKLKNLE VNQED

Arabidopsis Description

RANGAP2RANGAP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UQD1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.