Factsheet for Bra013834.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007730.1-P	Field mustard	cytosol, plastid	90.91	22.43
CDY56462	Canola	cytosol, plastid	88.64	21.87
Bra040432.1-P	Field mustard	plastid	79.55	19.59
EES07543	Sorghum	cytosol	37.12	19.52
Bra020788.1-P	Field mustard	cytosol, mitochondrion	34.09	19.07
Os05t0543200-01	Rice	plasma membrane	53.79	13.05
GSMUA_Achr11P...	Banana	cytosol, plastid	53.79	12.96
Zm00001d051112_P001	Maize	plasma membrane	50.0	12.79
Zm00001d017239_P001	Maize	mitochondrion, plasma membrane	49.24	12.43
TraesCS1A01G256200.1	Wheat	cytosol	51.52	12.36
Os05t0409200-00	Rice	cytosol	9.85	12.15
TraesCS1B01G266900.1	Wheat	plastid	50.0	11.98
EES05430	Sorghum	cytosol, nucleus, plastid	48.48	11.79
TraesCS1D01G255600.1	Wheat	cytosol, plastid	49.24	11.71
TraesCS3B01G433100.1	Wheat	cytosol, plastid	48.48	11.55
TraesCS3D01G394300.1	Wheat	cytosol, plastid	47.73	11.37
EES05435	Sorghum	cytosol, plastid	47.73	11.29
HORVU3Hr1G090080.1	Barley	plastid	46.21	11.01
TraesCS3A01G400100.1	Wheat	plastid	48.48	10.87
GSMUA_Achr8P13660_001	Banana	cytosol	46.97	10.13
HORVU1Hr1G063300.3	Barley	plastid	47.73	9.65
Bra020034.1-P	Field mustard	cytosol	9.09	4.88
Zm00001d034691_P001	Maize	cytosol	13.64	4.74
Bra019926.1-P	Field mustard	plastid	19.7	4.36
Bra018435.1-P	Field mustard	plastid	18.94	4.18
Zm00001d043604_P002	Maize	cytosol	15.15	3.72
Zm00001d046105_P001	Maize	peroxisome	15.91	3.57
Zm00001d052426_P001	Maize	cytosol	3.03	2.92
Bra026911.1-P	Field mustard	cytosol	0.76	0.76

Protein Annotations

EnsemblPlants:Bra013834.1	EnsemblPlants:Bra013834.1-P	EnsemblPlantsGene:Bra013834	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf
PANTHER:PTHR24106	PANTHER:PTHR24106:SF248	SEG:seg	SMART:SM00368	SUPFAM:SSF52047	UniParc:UPI0002546655
UniProt:M4DBH4	MapMan:35.1	:	:	:	:

Description

AT3G63130 (E=1e-031) RANGAP1 | RANGAP1 (RAN GTPASE ACTIVATING PROTEIN 1); RAN GTPase activator/ protein binding

Coordinates

chrA01:-:8002592..8003083

Molecular Weight (calculated)

14920.1 Da

IEP (calculated)

3.978

GRAVY (calculated)

-0.886

Length

132 amino acids

Sequence
(BLAST)

001: MLLFSRHFHQ HEENSYEGTI LIAKALEEGH DQLTEVDLST NMMRRAGARA LAQTVLKKPT LKLLNINGNF ISEEGVDEVS DMFKDSPDKL GPLDDNDPEG
101: EDFEDEDEEE EGEEESELEA KLGGLKIKQE EE

Best Arabidopsis Sequence Match ( AT3G63130.2 )
(BLAST)

001: MDHSAKTTQN RVLSVKMWPP SKSTRLMLVE RMTKNITTPS IFSRKYGLLS VEEAEQDAKR IEDLAFATAN KHFQNEPDGD GTSAVHVYAK ESSKLMLDVI
101: KRGPQEESEV EVSKDGDVFF DISGGSRAFI EEEEARDLLR PLADPRNSYT KIRFSNRSFG SEAAKFAASV LSSIKDQLTE VDLSDFVAGR PEAEALEVMN
201: MFSSALEGSK LRYLNLSDNA LGEKGIRAFA SLINSQHDLE ELYLMNDGIS EDAARAVREL LPSTDKIRVL QFHNNMTGDE GATAIAEIVR ECPSLEDFRC
301: SSTRIGSEGG VALAEALEHC SHLKKLDLRD NMFGVEGGIA LAKTLSVLTH LTEIYMSYLN LEDEGTEALS EALLKSAPSL EVLELAGNDI TVKSTGNLAA
401: CIASKQSLAK LNLSENELKD EGTILIAKAV EGHDQLVEVD LSTNMIRRAG ARALAQTVVK KNTFKLLNIN GNFISEEGID EVNDMFKDCL DKLVPLDDND
501: PEGEDFEDED EEEEGEDGNE LESKLGSLKI KQGEE

Arabidopsis Description

RANGAP1RAN GTPase-activating protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE82]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.