Factsheet for Bra026911.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002835.1-P
Bra008966.1-P
Bra026434.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G19320.1	Bra026434.1-P	AT4G26455.1	17600715
AT5G19320.1	Bra008966.1-P	AT5G11390.1	18591351
AT5G19320.1	Bra002835.1-P	AT5G56210.1	17600715

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16082	Canola	cytosol	83.33	97.35
Os05t0409200-00	Rice	cytosol	19.7	24.3
EES07543	Sorghum	cytosol	37.88	19.92
AT5G19320.1	Thale cress	cytosol	77.27	18.72
Bra020788.1-P	Field mustard	cytosol, mitochondrion	27.27	15.25
KRG91256	Soybean	endoplasmic reticulum	60.61	15.04
VIT_19s0014g03800.t01	Wine grape	cytosol, plastid	59.85	15.02
Solyc01g079680.2.1	Tomato	plastid	62.12	14.91
VIT_05s0020g02970.t01	Wine grape	cytosol, plastid	60.61	14.84
PGSC0003DMT400023310	Potato	plastid	61.36	14.65
KRH35557	Soybean	endoplasmic reticulum, nucleus	59.09	14.63
Zm00001d034691_P001	Maize	cytosol	39.39	13.68
Zm00001d051112_P001	Maize	plasma membrane	51.52	13.18
Bra040432.1-P	Field mustard	plastid	53.03	13.06
Zm00001d017239_P001	Maize	mitochondrion, plasma membrane	51.52	13.0
Bra007730.1-P	Field mustard	cytosol, plastid	52.27	12.9
EES05430	Sorghum	cytosol, nucleus, plastid	52.27	12.71
TraesCS1A01G256200.1	Wheat	cytosol	52.27	12.55
TraesCS1B01G266900.1	Wheat	plastid	52.27	12.52
TraesCS1D01G255600.1	Wheat	cytosol, plastid	52.27	12.43
GSMUA_Achr11P...	Banana	cytosol, plastid	51.52	12.41
EES05435	Sorghum	cytosol, plastid	52.27	12.37
Os05t0543200-01	Rice	plasma membrane	50.76	12.32
TraesCS3B01G433100.1	Wheat	cytosol, plastid	51.52	12.27
TraesCS3D01G394300.1	Wheat	cytosol, plastid	51.52	12.27
HORVU3Hr1G090080.1	Barley	plastid	50.76	12.09
TraesCS3A01G400100.1	Wheat	plastid	51.52	11.54
HORVU1Hr1G063300.3	Barley	plastid	52.27	10.57
GSMUA_Achr8P13660_001	Banana	cytosol	31.82	6.86
Bra018435.1-P	Field mustard	plastid	24.24	5.35
Bra019926.1-P	Field mustard	plastid	23.48	5.19
Bra020034.1-P	Field mustard	cytosol	9.09	4.88
Zm00001d052426_P001	Maize	cytosol	4.55	4.38
Zm00001d043604_P002	Maize	cytosol	15.91	3.91
Zm00001d046105_P001	Maize	peroxisome	14.39	3.23
Bra013834.1-P	Field mustard	cytosol	0.76	0.76

Protein Annotations

EnsemblPlants:Bra026911.1	EnsemblPlants:Bra026911.1-P	EnsemblPlantsGene:Bra026911	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	ncoils:Coil
PANTHER:PTHR24106	PANTHER:PTHR24106:SF248	PFAM:PF13516	SEG:seg	SMART:SM00368	SUPFAM:SSF52047
UniParc:UPI0002542EFE	UniProt:M4EDQ1	MapMan:35.1	:	:	:

Description

AT5G19320 (E=8e-039) RANGAP2 | RANGAP2 (RAN GTPASE ACTIVATING PROTEIN 2); RAN GTPase activator

Coordinates

chrA09:-:34257121..34257519

Molecular Weight (calculated)

14262.1 Da

IEP (calculated)

4.657

GRAVY (calculated)

-0.108

Length

132 amino acids

Sequence
(BLAST)

001: MTISRSVIQE NKTTKVGSEG GIALSEGLEC CAYMKKLDLR DNMFGAEAGV SLSKSLSSYK HLTELYLSYL NLEDEVAIAV AKALKECASP IEVLEMAGND
101: ITVEADSAIA ACVAEKQDLN KLNLSKNELK QK

Best Arabidopsis Sequence Match ( AT5G19320.2 )
(BLAST)

001: MADILDSRPH AFSIKLWPPS LPTRKALIER ITNNFSSKTI FTEKYGSLTK DQATENAKRI EDIAFSTANQ QFEREPDGDG GSAVQLYAKE CSKLILEVLK
101: KGPVAKVAAR ELISEDSVSP RETFFDISKG KRAFIEAEEA EELLKPLKEP GNAYTKICFS NRSFGLGAAR VAEPILASLK DQLKEVDLSD FVAGRPELEA
201: LEVMNIFSDA LQGSILSSLN LSDNALGEKG VRAFGALLKS LSSLEELYLM NDGISKEAAQ AVSELIPSTE NLRVLHFHNN MTGDEGALAI AEVVKRSPLL
301: ENFRCSSTRV GSKGGIALSE ALEHCTHMEK LDLRDNMFGT EAGVSLSKTL SSFKHMTELY LSYLNLEDEG AIAIVNALKE SASPIEVLEM AGNDITVEAA
401: SAIAACVAAK QDLNKLNLSE NELKDEGCVQ IANCIEEGHS KLQYIDMSTN YIRRAGARAL AHVVVKKEAF KLLNIDGNII SEEGIEELKE IFKKSPELLG
501: ALDENDPDGE EDDDDEEDEE DEENEGNGNG ELESKLKNLE VNQED

Arabidopsis Description

RANGAP2RANGAP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UQD1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.