Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- plasma membrane 1
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92540 | Canola | cytosol | 85.5 | 83.21 |
| Bra026911.1-P | Field mustard | cytosol | 18.72 | 77.27 |
| CDY02566 | Canola | cytosol | 28.07 | 77.27 |
| CDY16082 | Canola | cytosol | 15.96 | 76.99 |
| VIT_05s0020g02970.t01 | Wine grape | cytosol, plastid | 70.09 | 70.87 |
| KRG91256 | Soybean | endoplasmic reticulum | 68.81 | 70.49 |
| KRH35557 | Soybean | endoplasmic reticulum, nucleus | 68.81 | 70.36 |
| Solyc01g079680.2.1 | Tomato | plastid | 69.54 | 68.91 |
| VIT_19s0014g03800.t01 | Wine grape | cytosol, plastid | 66.42 | 68.82 |
| PGSC0003DMT400023310 | Potato | plastid | 68.81 | 67.81 |
| TraesCS1A01G256200.1 | Wheat | cytosol | 62.94 | 62.36 |
| EES05430 | Sorghum | cytosol, nucleus, plastid | 61.65 | 61.88 |
| GSMUA_Achr11P... | Banana | cytosol, plastid | 62.2 | 61.86 |
| TraesCS1B01G266900.1 | Wheat | plastid | 62.02 | 61.34 |
| AT3G63130.1 | Thale cress | plastid | 60.18 | 61.31 |
| Os05t0543200-01 | Rice | plasma membrane | 61.1 | 61.21 |
| TraesCS1D01G255600.1 | Wheat | cytosol, plastid | 61.83 | 60.72 |
| TraesCS3D01G394300.1 | Wheat | cytosol, plastid | 61.47 | 60.47 |
| TraesCS3B01G433100.1 | Wheat | cytosol, plastid | 61.47 | 60.47 |
| Zm00001d051112_P001 | Maize | plasma membrane | 57.25 | 60.47 |
| HORVU3Hr1G090080.1 | Barley | plastid | 61.1 | 60.11 |
| EES05435 | Sorghum | cytosol, plastid | 61.47 | 60.04 |
| Zm00001d017239_P001 | Maize | mitochondrion, plasma membrane | 57.25 | 59.66 |
| TraesCS3A01G400100.1 | Wheat | plastid | 61.65 | 57.05 |
| EES07543 | Sorghum | cytosol | 25.87 | 56.18 |
| HORVU1Hr1G063300.3 | Barley | plastid | 61.65 | 51.45 |
| AT3G06000.1 | Thale cress | cytosol | 19.45 | 50.24 |
| Zm00001d052426_P001 | Maize | cytosol | 11.56 | 45.99 |
| Zm00001d034691_P001 | Maize | cytosol | 31.74 | 45.53 |
| GSMUA_Achr8P13660_001 | Banana | cytosol | 48.81 | 43.46 |
| Os05t0409200-00 | Rice | cytosol | 7.89 | 40.19 |
| Zm00001d043604_P002 | Maize | cytosol | 31.74 | 32.22 |
| Zm00001d046105_P001 | Maize | peroxisome | 32.66 | 30.27 |
| AT1G10510.1 | Thale cress | plastid | 19.27 | 17.36 |
Protein Annotations
| Gene3D:1.10.246.200 | MapMan:23.5.1.5 | Gene3D:3.80.10.10 | EntrezGene:832052 | UniProt:A0A178UQD1 | ProteinID:AED92685.1 |
| EMBL:AF214560 | EMBL:AF296837 | ProteinID:ANM69837.1 | ArrayExpress:AT5G19320 | EnsemblPlantsGene:AT5G19320 | RefSeq:AT5G19320 |
| TAIR:AT5G19320 | RefSeq:AT5G19320-TAIR-G | EnsemblPlants:AT5G19320.1 | TAIR:AT5G19320.1 | Unigene:At.11887 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005096 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 |
| GO:GO:0005783 | GO:GO:0005819 | GO:GO:0005856 | GO:GO:0006810 | GO:GO:0006913 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009524 | GO:GO:0009536 | GO:GO:0009628 | GO:GO:0009651 |
| GO:GO:0016020 | GO:GO:0030234 | GO:GO:0031965 | GO:GO:0043547 | InterPro:IPR001611 | InterPro:IPR032675 |
| InterPro:IPR038214 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | RefSeq:NP_001318597.1 | RefSeq:NP_197433.1 | ProteinID:OAO94871.1 |
| PFAM:PF13516 | PFAM:PF13943 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR24106 | PANTHER:PTHR24106:SF248 | UniProt:Q9M651 |
| Symbol:RANGAP2 | SMART:SM00368 | SUPFAM:SSF52047 | UniParc:UPI0000162500 | InterPro:WPP_dom | InterPro:WPP_sf |
| SEG:seg | : | : | : | : | : |
Description
RANGAP2RANGAP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UQD1]
Coordinates
chr5:-:6505092..6507645
Molecular Weight (calculated)
59655.3 Da
IEP (calculated)
4.335
GRAVY (calculated)
-0.343
Length
545 amino acids
Sequence
(BLAST)
(BLAST)
001: MADILDSRPH AFSIKLWPPS LPTRKALIER ITNNFSSKTI FTEKYGSLTK DQATENAKRI EDIAFSTANQ QFEREPDGDG GSAVQLYAKE CSKLILEVLK
101: KGPVAKVAAR ELISEDSVSP RETFFDISKG KRAFIEAEEA EELLKPLKEP GNAYTKICFS NRSFGLGAAR VAEPILASLK DQLKEVDLSD FVAGRPELEA
201: LEVMNIFSDA LQGSILSSLN LSDNALGEKG VRAFGALLKS LSSLEELYLM NDGISKEAAQ AVSELIPSTE NLRVLHFHNN MTGDEGALAI AEVVKRSPLL
301: ENFRCSSTRV GSKGGIALSE ALEHCTHMEK LDLRDNMFGT EAGVSLSKTL SSFKHMTELY LSYLNLEDEG AIAIVNALKE SASPIEVLEM AGNDITVEAA
401: SAIAACVAAK QDLNKLNLSE NELKDEGCVQ IANCIEEGHS KLQYIDMSTN YIRRAGARAL AHVVVKKEAF KLLNIDGNII SEEGIEELKE IFKKSPELLG
501: ALDENDPDGE EDDDDEEDEE DEENEGNGNG ELESKLKNLE VNQED
101: KGPVAKVAAR ELISEDSVSP RETFFDISKG KRAFIEAEEA EELLKPLKEP GNAYTKICFS NRSFGLGAAR VAEPILASLK DQLKEVDLSD FVAGRPELEA
201: LEVMNIFSDA LQGSILSSLN LSDNALGEKG VRAFGALLKS LSSLEELYLM NDGISKEAAQ AVSELIPSTE NLRVLHFHNN MTGDEGALAI AEVVKRSPLL
301: ENFRCSSTRV GSKGGIALSE ALEHCTHMEK LDLRDNMFGT EAGVSLSKTL SSFKHMTELY LSYLNLEDEG AIAIVNALKE SASPIEVLEM AGNDITVEAA
401: SAIAACVAAK QDLNKLNLSE NELKDEGCVQ IANCIEEGHS KLQYIDMSTN YIRRAGARAL AHVVVKKEAF KLLNIDGNII SEEGIEELKE IFKKSPELLG
501: ALDENDPDGE EDDDDEEDEE DEENEGNGNG ELESKLKNLE VNQED
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.