Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20626 | Canola | plastid | 83.14 | 84.25 |
| Bra018435.1-P | Field mustard | plastid | 82.48 | 83.44 |
| Bra019926.1-P | Field mustard | plastid | 79.67 | 80.74 |
| CDX93413 | Canola | plastid | 79.67 | 80.74 |
| CDY55048 | Canola | plastid | 79.5 | 80.57 |
| CDY20954 | Canola | plastid | 80.0 | 80.4 |
| VIT_01s0026g00610.t01 | Wine grape | mitochondrion | 64.63 | 78.2 |
| PGSC0003DMT400040302 | Potato | plastid | 64.79 | 64.37 |
| Solyc05g006170.2.1 | Tomato | plastid | 64.63 | 64.1 |
| KRH69472 | Soybean | nucleus | 62.48 | 62.38 |
| KRH74682 | Soybean | plastid | 60.83 | 60.73 |
| GSMUA_Achr9P28160_001 | Banana | plastid | 60.5 | 59.32 |
| TraesCS7D01G196000.1 | Wheat | plastid | 55.04 | 54.23 |
| TraesCS7A01G194400.1 | Wheat | plastid | 54.71 | 53.82 |
| TraesCS7B01G100000.1 | Wheat | plastid | 53.88 | 53.18 |
| Os06t0237502-00 | Rice | plastid | 53.88 | 53.09 |
| HORVU7Hr1G039610.2 | Barley | cytosol, peroxisome, plastid | 54.21 | 51.82 |
| Zm00001d044774_P004 | Maize | plastid | 50.91 | 47.46 |
| KXG19681 | Sorghum | plastid | 51.41 | 47.26 |
| AT3G06000.1 | Thale cress | cytosol | 7.27 | 20.85 |
| AT5G19320.1 | Thale cress | cytosol | 17.36 | 19.27 |
| AT3G63130.1 | Thale cress | plastid | 16.86 | 19.07 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:837591 | UniProt:A0A178W753 | ProteinID:AEE28587.1 | ArrayExpress:AT1G10510 |
| EnsemblPlantsGene:AT1G10510 | RefSeq:AT1G10510 | TAIR:AT1G10510 | RefSeq:AT1G10510-TAIR-G | EnsemblPlants:AT1G10510.1 | TAIR:AT1G10510.1 |
| EMBL:AY056236 | EMBL:AY091215 | Unigene:At.26354 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009941 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt |
| RefSeq:NP_563871.1 | ProteinID:OAP13884.1 | PFAM:PF13516 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | UniProt:Q93ZV8 | SMART:SM00368 |
| SUPFAM:SSF52047 | UniParc:UPI00000A1DEF | Symbol:emb2004 | SEG:seg | : | : |
Description
emb2004RNI-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q93ZV8]
Coordinates
chr1:+:3461635..3465786
Molecular Weight (calculated)
64726.0 Da
IEP (calculated)
7.677
GRAVY (calculated)
-0.134
Length
605 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSTSSLN LHSLPKASSG LGQWKSGFRY ELLGSSVSRN RLFVSPVVIH HRSPRLPAIK AAYNSDGGSK RSRVYKESQA ASGFPNAKVQ QIASSVLPLG
101: SFAVVTFVLW KVVGKFMSPK SPKTSAGENN SSTQGVKWSI GAGTNLLQGF AAKVDREAKQ RLNEFAKELR SFRSVDMSGC NFGDEGLFFL AESLGYNQTV
201: EEVSFSANGI TAAGVKAFDG VLQSNIMLKI LNLSGNPIGD EGAKTLCATL MENSSIEILQ LNSTDIGDEG AKEIAELLKR NSTLRIIELN NNMIDYSGFT
301: SLAGALLENN TIRNLHLNGN YGGALGANAL AKGLEGNKSL RELHLHGNSI GDEGTRALMA GLSSHKGKVA LLDLGNNSIS AKGAFYVAEY IKRSKSLVWL
401: NLYMNDIGDE GAEKIADSLK QNRSIATIDL GGNNIHAEGV NAIAQALKDN AIITTLEVGY NPIGPDGAKA LSEILKFHGN VKTLKLGWCQ IAAKGAEHVA
501: DMLRYNNTIS VLDLRANGLR DEGASCLARS LKVVNEALTS VDLGFNEIRD DGAFAIAQAL KANEDVTVTS INLGNNFITK FGQSALTDAR DHVLEMTEKE
601: VEIFF
101: SFAVVTFVLW KVVGKFMSPK SPKTSAGENN SSTQGVKWSI GAGTNLLQGF AAKVDREAKQ RLNEFAKELR SFRSVDMSGC NFGDEGLFFL AESLGYNQTV
201: EEVSFSANGI TAAGVKAFDG VLQSNIMLKI LNLSGNPIGD EGAKTLCATL MENSSIEILQ LNSTDIGDEG AKEIAELLKR NSTLRIIELN NNMIDYSGFT
301: SLAGALLENN TIRNLHLNGN YGGALGANAL AKGLEGNKSL RELHLHGNSI GDEGTRALMA GLSSHKGKVA LLDLGNNSIS AKGAFYVAEY IKRSKSLVWL
401: NLYMNDIGDE GAEKIADSLK QNRSIATIDL GGNNIHAEGV NAIAQALKDN AIITTLEVGY NPIGPDGAKA LSEILKFHGN VKTLKLGWCQ IAAKGAEHVA
501: DMLRYNNTIS VLDLRANGLR DEGASCLARS LKVVNEALTS VDLGFNEIRD DGAFAIAQAL KANEDVTVTS INLGNNFITK FGQSALTDAR DHVLEMTEKE
601: VEIFF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.