Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- plasma membrane 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g006170.2.1 | Tomato | plastid | 92.45 | 92.3 |
| VIT_01s0026g00610.t01 | Wine grape | mitochondrion | 62.56 | 76.2 |
| AT1G10510.1 | Thale cress | plastid | 64.37 | 64.79 |
| CDY20626 | Canola | plastid | 62.89 | 64.15 |
| Bra018435.1-P | Field mustard | plastid | 62.4 | 63.55 |
| CDY55048 | Canola | plastid | 62.07 | 63.32 |
| Bra019926.1-P | Field mustard | plastid | 61.74 | 62.98 |
| CDX93413 | Canola | plastid | 61.74 | 62.98 |
| CDY20954 | Canola | plastid | 61.08 | 61.79 |
| KRH69472 | Soybean | nucleus | 61.08 | 61.39 |
| KRH74682 | Soybean | plastid | 59.61 | 59.9 |
| GSMUA_Achr9P28160_001 | Banana | plastid | 60.59 | 59.81 |
| Os06t0237502-00 | Rice | plastid | 56.16 | 55.7 |
| TraesCS7D01G196000.1 | Wheat | plastid | 53.53 | 53.09 |
| TraesCS7B01G100000.1 | Wheat | plastid | 52.87 | 52.53 |
| TraesCS7A01G194400.1 | Wheat | plastid | 52.87 | 52.36 |
| HORVU7Hr1G039610.2 | Barley | cytosol, peroxisome, plastid | 53.53 | 51.5 |
| Zm00001d044774_P004 | Maize | plastid | 51.56 | 48.38 |
| KXG19681 | Sorghum | plastid | 51.56 | 47.72 |
| PGSC0003DMT400023310 | Potato | plastid | 16.58 | 18.26 |
| PGSC0003DMT400086322 | Potato | cytosol | 15.76 | 17.98 |
Protein Annotations
| EntrezGene:102602530 | Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009941 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt |
| UniProt:M1B9P5 | PFAM:PF13516 | EnsemblPlantsGene:PGSC0003DMG400015603 | PGSC:PGSC0003DMG400015603 | EnsemblPlants:PGSC0003DMT400040302 | SMART:SM00368 |
| SUPFAM:SSF52047 | UniParc:UPI000295A18C | RefSeq:XP_006355934.1 | SEG:seg | : | : |
Description
Chloroplast envelope protein 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400015603]
Coordinates
chr5:+:7164479..7174355
Molecular Weight (calculated)
65585.9 Da
IEP (calculated)
8.669
GRAVY (calculated)
-0.061
Length
609 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSSTFSLC SHPTVNFEFN GRKVGYGLQK SLSSSSSYCL IHISPICISS RRKCLQLRRV IVRAASSSST GPRRSTNTRR VYKESQAQTP ALPVDRIVSF
101: VVPAGAFVVI SFVLWKLVEK VLLPKPAKTT SEESKSTQGL KWSIAAGTNL LPGFGAKIER ESKLRLNDFA KELRSFSIVD MSGRNFGDEG LFFLAESLAY
201: NQTAEEVNFA ANGITADGLK AFDGILQSNI ALKTLNLSGN AIGDEGAKCL CDILANNSGI QKLQLNSTGL GDEGAKAIGE MLKKNSTLRV LELNNNLIDY
301: SGFSGLAGSL LENKTLQSLH LNGNYGGALG AAALAKGLES NKSLRELYMQ GNSVGDEGVR ALISGLSLRK GKLVLLDLAN NSITARGAFH VAEYVKKSKS
401: LLWLNLYMND IKDEGAEKIA EALKENRSIT NVDLGGNDIH AKGISAIAEV LKDNSVITSL ELGYNPIGPE GAMALAEVLK FHGKVKDLML GWCQIGAKGA
501: EYFADMLKYN STISTLDLRA NGLRDEGAIC LARSLKVVNE SLTTLNLGFN EIRDEGAFAI AQALKANEDV RLTSLNLASN FLTKLGQTAL TDARDHVFEM
601: TEKELAVMF
101: VVPAGAFVVI SFVLWKLVEK VLLPKPAKTT SEESKSTQGL KWSIAAGTNL LPGFGAKIER ESKLRLNDFA KELRSFSIVD MSGRNFGDEG LFFLAESLAY
201: NQTAEEVNFA ANGITADGLK AFDGILQSNI ALKTLNLSGN AIGDEGAKCL CDILANNSGI QKLQLNSTGL GDEGAKAIGE MLKKNSTLRV LELNNNLIDY
301: SGFSGLAGSL LENKTLQSLH LNGNYGGALG AAALAKGLES NKSLRELYMQ GNSVGDEGVR ALISGLSLRK GKLVLLDLAN NSITARGAFH VAEYVKKSKS
401: LLWLNLYMND IKDEGAEKIA EALKENRSIT NVDLGGNDIH AKGISAIAEV LKDNSVITSL ELGYNPIGPE GAMALAEVLK FHGKVKDLML GWCQIGAKGA
501: EYFADMLKYN STISTLDLRA NGLRDEGAIC LARSLKVVNE SLTTLNLGFN EIRDEGAFAI AQALKANEDV RLTSLNLASN FLTKLGQTAL TDARDHVFEM
601: TEKELAVMF
001: MASSSTSSLN LHSLPKASSG LGQWKSGFRY ELLGSSVSRN RLFVSPVVIH HRSPRLPAIK AAYNSDGGSK RSRVYKESQA ASGFPNAKVQ QIASSVLPLG
101: SFAVVTFVLW KVVGKFMSPK SPKTSAGENN SSTQGVKWSI GAGTNLLQGF AAKVDREAKQ RLNEFAKELR SFRSVDMSGC NFGDEGLFFL AESLGYNQTV
201: EEVSFSANGI TAAGVKAFDG VLQSNIMLKI LNLSGNPIGD EGAKTLCATL MENSSIEILQ LNSTDIGDEG AKEIAELLKR NSTLRIIELN NNMIDYSGFT
301: SLAGALLENN TIRNLHLNGN YGGALGANAL AKGLEGNKSL RELHLHGNSI GDEGTRALMA GLSSHKGKVA LLDLGNNSIS AKGAFYVAEY IKRSKSLVWL
401: NLYMNDIGDE GAEKIADSLK QNRSIATIDL GGNNIHAEGV NAIAQALKDN AIITTLEVGY NPIGPDGAKA LSEILKFHGN VKTLKLGWCQ IAAKGAEHVA
501: DMLRYNNTIS VLDLRANGLR DEGASCLARS LKVVNEALTS VDLGFNEIRD DGAFAIAQAL KANEDVTVTS INLGNNFITK FGQSALTDAR DHVLEMTEKE
601: VEIFF
101: SFAVVTFVLW KVVGKFMSPK SPKTSAGENN SSTQGVKWSI GAGTNLLQGF AAKVDREAKQ RLNEFAKELR SFRSVDMSGC NFGDEGLFFL AESLGYNQTV
201: EEVSFSANGI TAAGVKAFDG VLQSNIMLKI LNLSGNPIGD EGAKTLCATL MENSSIEILQ LNSTDIGDEG AKEIAELLKR NSTLRIIELN NNMIDYSGFT
301: SLAGALLENN TIRNLHLNGN YGGALGANAL AKGLEGNKSL RELHLHGNSI GDEGTRALMA GLSSHKGKVA LLDLGNNSIS AKGAFYVAEY IKRSKSLVWL
401: NLYMNDIGDE GAEKIADSLK QNRSIATIDL GGNNIHAEGV NAIAQALKDN AIITTLEVGY NPIGPDGAKA LSEILKFHGN VKTLKLGWCQ IAAKGAEHVA
501: DMLRYNNTIS VLDLRANGLR DEGASCLARS LKVVNEALTS VDLGFNEIRD DGAFAIAQAL KANEDVTVTS INLGNNFITK FGQSALTDAR DHVLEMTEKE
601: VEIFF
Arabidopsis Description
emb2004RNI-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q93ZV8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.